CK933104

Overview
NameCK933104
Unique NameCK933104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5664 contig Csv1_Contig5664:29..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 365.54 bits (937), Expect = 1.922e-100
Identity = 174/228 (76.32%), Postives = 194/228 (85.09%), Query Frame = 3
Query:  114 MAKMSLIFSLFVGLLMVV----LVSSAKFDDLYQTSWAFDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPAS 785
            M  M L   + + +++VV     VS AKFD+LY++SWA DH   +G+  KL LDNYSGAGF S+SKYLFGKVSIQIKLV GDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPY+VQTN+YVNGVGNREQRL+LWFDPT EFHTYS+LW++R VVF+VDETPIRV  NLE KGIPF KDQAMGVYSSIWNADDWATQGG VKTDWSHAPF+ASYK F IDACE P +
Sbjct:    1 MVGMDLFKCVMMIMVLVVSCGEAVSGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTT 228          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.777e-72
Identity = 125/212 (58.96%), Postives = 154/212 (72.64%), Query Frame = 3
Query:  183 KFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKK 812
            +F   Y  +WAFDH++Y   G  ++L+LD Y+G GF SK  YLFG  S+ IK+V GDSAGTVTAFY+SS    H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPTKE+H YS+LWN  Q+VF VDE PIRV  N +  G+ FP DQ M +Y+S+WNADDWAT+GG  KTDWS APFIA+YKGF ID CE   +    D   K
Sbjct:   32 QFGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGK 243          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.535e-70
Identity = 122/207 (58.94%), Postives = 150/207 (72.46%), Query Frame = 3
Query:  198 YQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKK 812
            Y  +WAFDH++Y   G  ++L+LD Y+G GF SK  YLFG  S+ IKLV GDSAGTVTAFY+SS    H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPT ++H YS+LWN  Q+VF VD+ PIRV  N    G+ FP +Q M +Y+S+WNADDWAT+GG  KTDWS APFIASYKGF ID CE   +    D   K
Sbjct:   35 YVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGK 241          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 6.030e-70
Identity = 116/194 (59.79%), Postives = 148/194 (76.29%), Query Frame = 3
Query:  198 YQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACE 773
            Y  +WAFDH++Y   G  + L LD Y+G GF SK  YLFG  S+ IK+V GDSAGTVTAFY+SS    H+E DFEFLGN TG+PY++QTNV+  G GNREQR++LWFDP+K++H+YS+LWN  Q+VF VD+ PIRV  N +  G+ FP +Q M +YSS+WNADDWAT+GG  KT+W  APF+ASY+GF +D CE
Sbjct:   36 YFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCE 229          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 7.876e-70
Identity = 119/201 (59.20%), Postives = 151/201 (75.12%), Query Frame = 3
Query:  186 FDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPA 782
            FD  Y  +WA DH+ Y   G  ++L+LD  +G GF ++  YLFG  S+ IKLVGGDSAGTVTAFY+SS    H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPTK++H+YS+LWN   + F VD+TPIRV  N +  G+ +P DQ M +YSS+WNADDWAT+GGR KTDWS APF+ASY+GF +D CE  A
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASA 232          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 7.876e-70
Identity = 126/224 (56.25%), Postives = 158/224 (70.54%), Query Frame = 3
Query:  141 LFVGLLMVVLVSSA-----------KFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACE 773
            L + L++V L SSA            F   Y  +WAFDH++Y   G  ++L+LD Y+G GF +K  YLFG  S+ IK+V GDSAGTVTAF +SS    H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPTK +H YS+LWN  Q+VFLVD  PIRV  NL+  G+ FP +Q M VY+S+WNADDWAT+GG  KTDWS APF+A YKGF +D CE
Sbjct:    6 LILCLVLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCE 229          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 1.137e-68
Identity = 119/217 (54.84%), Postives = 160/217 (73.73%), Query Frame = 3
Query:  138 SLFVGLLMVVLVSSA---KFDDLYQTSWAFDH---VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDAC 770
            ++ + LL+V +  +A    F++ +  +W  +H   +   G  L L+LD  SG+GF SK +YLFG++ +Q+KLV G+SAGTVTA+Y+SS+GP H+E DFEFLGN TG+PY++ TNV+  G GNREQ+  LWFDPTK FHTYSL+W  + ++F+VD  PIRV  N E  G+PFPK+Q M +YSS+WNADDWAT+GG VKTDWS APF A Y+GF+  AC
Sbjct:    8 TVLMTLLVVTMAGTAFSGSFNEEFDLTWG-EHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAAC 223          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.644e-68
Identity = 122/225 (54.22%), Postives = 159/225 (70.67%), Query Frame = 3
Query:  114 MAKMSLIFSLFVGLLMVVLVSSA---KFDDLYQTSWAFDH---VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDAC 770
            M   S + ++   +L+V L  SA    F D +  +W  DH   +   G+ L L+LD  SG+GF SK +YLFG++ +Q+KLV G+SAGTVTA+Y+SS G  H+E DFEFLGN TG+PY++ TNV+  G G+REQ+  LWFDPTK FHTYS++W  + ++FLVD  PIRV  N E  G+PFPK Q M +YSS+WNADDWAT+GG VKTDWS APF A Y+GF+  AC
Sbjct:    1 MGPSSSLTTIVATVLLVTLFGSAYASNFFDEFDLTWG-DHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAAC 224          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 6.240e-67
Identity = 122/231 (52.81%), Postives = 165/231 (71.43%), Query Frame = 3
Query:  126 SLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDHV-QYDGD-TLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAK 809
            +L   LF  L   V+   AKF+D ++ +W+  H+ Q DG   ++L LD  SG GFASK +YLFG+VS++IKL+ GDSAGTVTAFYM+SD  +  +E DFEFLGN +G+PY VQTNV+ +G G+REQR++LWFDP+++FH Y++ WN  ++VF VD  PIRV+ N E + +P+P+ Q MGVYS++W ADDWAT+GG  K +WS APF A YK FDI+ C  P       N+K
Sbjct:   14 TLSLCLFAALYQPVMSRPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSK 244          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.390e-66
Identity = 113/209 (54.07%), Postives = 153/209 (73.21%), Query Frame = 3
Query:  141 LFVGLLMVVLVSSA--KFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGF 755
            + VG+++  +V++    F   +  +W  D  +    G  L L+LD  SG+GF SK +YLFG++ +Q+KLV G+SAGTVTA+Y+SS GP H+E DFEFLGN +G+PY++ TN++  G GNREQ+  LWFDPT+ FHTYS++W  + ++FLVD TPIRV  N E  G+PFPK+Q M +YSS+WNADDWAT+GG VKTDWS APF A Y+ F
Sbjct:   15 MLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNF 223          
The following BLAST results are available for this feature:
BLAST of CK933104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
XTH9_ARATH1.922e-10076.32Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN3.777e-7258.96Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN3.535e-7058.94Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH6.030e-7059.79Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT7.876e-7059.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN7.876e-7056.25Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH1.137e-6854.84Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH5.644e-6854.22Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH6.240e-6752.81Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN1.390e-6654.07Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_F04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933104 ID=CK933104; Name=CK933104; organism=Citrus sinensis; type=EST; length=814bp
GCGGGGACAGATCAGCATCTTATAAGTAGAANNNTCAACTTCCCTCCACN
NNNNNNGGCTTGCTCTGCTCATTCGCTTACTTCCTCTCCCCGTTCTTCTG
TCTTCATTCTTCAATGGCTAAAATGTCTTTGATTTTCAGTCTGTTTGTGG
GTCTTTTAATGGTGGTTTTGGTCAGCTCAGCTAAGTTTGATGATCTTTAT
CAAACAAGCTGGGCTTTTGATCATGTTCAGTATGATGGGGACACTCTCAA
GCTTAACCTCGATAATTATTCCGGAGCTGGGTTTGCGTCAAAGAGCAAGT
ATTTGTTTGGGAAAGTCTCCATCCAAATTAAACTTGTAGGGGGTGACTCT
GCTGGAACTGTCACTGCCTTCTATATGTCATCAGACGGTCCAAATCACAA
CGAGTTCGATTTTGAGTTCCTGGGGAACACTACAGGAGAGCCATACTTAG
TCCAAACCAATGTTTATGTGAATGGTGTGGGCAACAGAGAGCAGAGACTT
GACCTCTGGTTCGACCCAACAAAGGAATTTCATACCTATTCCCTCCTTTG
GAACCAGCGCCAAGTTGTATTTTTGGTGGATGAGACCCCAATTAGAGTGC
ACACTAACTTGGAGCACAAAGGAATTCCCTTTCCAAAGGACCAAGCCATG
GGTGTGTACAGTTCAATATGGAATGCTGATGACTGGGCCACACAGGGGGG
AAGGGTCAAGACTGACTGGAGCCATGCACCTTTTATTGCATCATACAAGG
GCTTTGATATTGATGCATGCGAGTGCCCAGCGTCGGTTGCAGGTGCCGAT
AATGCCAAAAAATG
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