CK933108

Overview
NameCK933108
Unique NameCK933108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK933108 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.313e-22
Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 3 
Query:   12 DSIKHLPRFQPGNLEHNQKLFECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIE 212
            D  K+LPRFQ  NLE+N+ L+E + E+A  KGCTPSQLALAWVHHQG+DVCPIPGTTKI NLN+N++
Sbjct:  236 DYRKYLPRFQAENLENNKNLYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNMK 302
[Close]
BLAST of CK933108 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.359e-14
Identity = 44/117 (37.61%), Postives = 59/117 (50.43%), Query Frame = 3 
Query:    6 EGDSIKHLPRFQPGNLEHNQKLFECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELEAIASADNVKGDRYPXXXXXXXXXXXXXADTPPL 356
            EGD  +  PR+Q  N   N +L   + +IA     TP QL+LAW+  QGDD+ PIPGT ++  L EN  AL VK++   + E+        V G RYP              DTPP+
Sbjct:  227 EGDFRRKAPRYQKENFYKNLELVTKIEKIATANNITPGQLSLAWLLAQGDDILPIPGTKRVKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYP-----PGAGSKIFMDTPPM 338
The following BLAST results are available for this feature:
BLAST of CK933108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
A115_TOBAC2.313e-2270.15Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
YAKC_SCHPO1.359e-1437.61Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004347_D11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933108 ID=CK933108; Name=CK933108; organism=Citrus sinensis; type=EST; length=559bp
GGGCAGAGGGAGATTCTATAAAGCACCTACCAAGATTCCAGCCTGGAAAT
TTGGAGCATAACCAAAAGCTATTTGAATGTGTTAATGAAATAGCTGCGAA
CAAAGGGTGCACCCCATCACAGCTTGCATTAGCCTGGGTTCATCACCAAG
GAGATGACGTATGTCCCATTCCTGGAACCACCAAGATTGCCAACCTCAAT
GAAAATATTGAGGCTCTGTCAGTGAAAATAACTCCAGAAGAAATGGCCGA
ACTTGAAGCTATTGCTTCAGCAGATAATGTGAAGGGTGACAGATATCCGA
GTTCCTCGGGTACTTACAAGAGCTCTACTTACAAGACTGCTGATACCCCA
CCATTGTCTTCATGGAACCCTTCTTAAAATGGATTGCTTTTAGCCATGGC
TATTCTGCCTCTCTGGTCCCAGTATGCACTTTCAGAATACCAGAATAAGG
CAGTAAATTTGTTATGGATAAGATCGTTTGTTACATAAACTTTCTCACAA
TATTTTCATCCGAAGTGTTGAGATGACACTCCTTGTATGTATAAATAGAA
CCGTTTGGC
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