CK933137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A_ORYSJ (60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27 Identity = 59/82 (71.95%), Postives = 67/82 (81.71%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQXXXXXXXXXXXXXXXQRLT 248 +GK+RLGSIVHKKTASVLCLTTVKNEDK+EFSKILEAIKANFNDK++E+RKKWGGG+MGSKSQ QR+T Sbjct: 177 KGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 7.553e-27 Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 191 +GKSRLG++VH+KTAS LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 176 KGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 238
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.288e-26 Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 191 +GKSRLG++VH+KTA+ LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 175 KGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 237
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A_DROME (60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 3.181e-17 Identity = 37/62 (59.68%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 188 +GK+RLG +V +KT + L LTTV N DK F K+LEA+K NFN+++EE+R+ WGGGI+GSKS Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL8_SCHPO (60S ribosomal protein L8 OS=Schizosaccharomyces pombe GN=rpl8 PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 7.834e-16 Identity = 35/63 (55.56%), Postives = 51/63 (80.95%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 191 + K+RLG+++H+KTA+VL +T V+ EDK E + I+ A+ ANF+ KY+E R+KWGGGIMG K+Q Sbjct: 181 KNKARLGTVIHQKTAAVLAVTEVREEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKTQ 243
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A_ICTPU (60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.888e-15 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 188 +GK+RLG +VH+KT + +C T ED+ +K++EAIK N+ND+YEE+R+ WGG IMG KS Sbjct: 185 KGKARLGRLVHRKTCTSVCFTQTNPEDRAALAKLVEAIKTNYNDRYEEIRRHWGGNIMGPKS 246
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.477e-14 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 188 +GK+RLG +VH+KT + + T EDK +K++EAIK N+ND+YEE+R+ WGGGI+G KS Sbjct: 185 KGKARLGRLVHRKTCTSVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKS 246
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A_BOVIN (60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 2.520e-14 Identity = 30/62 (48.39%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 188 +GK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 185 KGKARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A_ANOGA (60S ribosomal protein L7a OS=Anopheles gambiae GN=RpL7A PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.291e-14 Identity = 30/62 (48.39%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 188 +GK+RLG++V++KT + + LT V+N DK +K++E IK NFND+++++R+ WGGG++G KS Sbjct: 191 KGKARLGTLVYRKTCTCVALTQVENADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKS 252
BLAST of CK933137 vs. ExPASy Swiss-Prot
Match: RL7A_RAT (60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.299e-14 Identity = 30/62 (48.39%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 3 EGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 188 +GK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 185 KGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246 The following BLAST results are available for this feature:
BLAST of CK933137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933137 ID=CK933137; Name=CK933137; organism=Citrus sinensis; type=EST; length=404bpback to top |