CK933152

Overview
NameCK933152
Unique NameCK933152
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length452
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10923 contig Csv1_Contig10923:666..1117. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.370e-46
Identity = 98/145 (67.59%), Postives = 105/145 (72.41%), Query Frame = 1
Query:   19 SFSKS--IDVSTEFSSSRFSDIV--GPR------DEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            SFSKS  +D S  FSSSR+SDI   GP        + DE K+RPLILRNKAPRWHEQLQCWCLNF+GRVTVASVKNFQL+                     DHDK+ILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLAC
Sbjct:  300 SFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 444          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 5.756e-45
Identity = 97/149 (65.10%), Postives = 104/149 (69.80%), Query Frame = 1
Query:   10 SLRSFSKS--------IDVSTEFSSSRFSDIVGPR---DEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            S  SFSKS           S +FSS+RFSDI G     DEE + K+RPL+LRNKAPRWHEQLQCWCLNFRGRVT+ASVKNFQLI                     + DKIILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLAC
Sbjct:  298 STTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLI--AAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 444          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.857e-44
Identity = 94/142 (66.20%), Postives = 104/142 (73.24%), Query Frame = 1
Query:   10 SLRSFSKSI-DVSTEFSSSRFSDIVGP---RDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            S  SFSKSI D S +FSS+RFSDI G     D+  E K+RPL+LRNK PRWHEQLQCWCLNFRGRVT+ASVKNFQL+                     D +K+ILQFGKV +DMFTMDYRYPLSAFQAFAICLSSFDTKLAC
Sbjct:  308 STTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLV--AAPSPPPAGAPTPSQPGPADPEKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 447          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 6.364e-44
Identity = 96/158 (60.76%), Postives = 106/158 (67.09%), Query Frame = 1
Query:    4 EDSLRSFSKS-----IDVSTEFSSSRFSDIVGP-----RDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXX--------DHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            E+S RS + S     +D S +FSSSRFS+I G       D+  E K+RPL+LRNK PRWHEQLQCWCLNFRGRVTVASVKNFQLI                             DH K+ILQFGKVGKDMFTMDYRYPLSAFQAFAICL+SFDTKLAC
Sbjct:  293 EESFRSTNTSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLAC 450          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.852e-43
Identity = 97/153 (63.40%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    4 EDSLRS--FSKS--IDVSTEFSSSRFSDIV---GPR------DEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            E S RS  FSKS  +D S  FSS++FSDI    GPR       +++E K+ PLIL+NKAPRWHEQLQCWCLNFRGRVTVASVKNFQLI                     +HDK+ILQFGKV KDMFTMDY YPLSAFQAFAI LSSFDTKLAC
Sbjct:  287 ESSFRSVSFSKSSVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLAC 439          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 2.418e-43
Identity = 96/161 (59.63%), Postives = 108/161 (67.08%), Query Frame = 1
Query:    4 EDSLRSFSKS------IDVSTEFSSSRFSDIVGPRDEE-----DEGKDR---PLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXD-------HDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            ++S RS + S       D S +FSS+RFSDI+GP  E+     +EGK+R   PL+L+NK PRWHEQLQCWCLNFRGRVTVASVKNFQLI                              DKIILQFGKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLAC
Sbjct:  294 DESFRSITSSSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLAC 454          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 5.387e-43
Identity = 95/148 (64.19%), Postives = 105/148 (70.95%), Query Frame = 1
Query:    4 EDSLRS---FSKSI--DVSTEFSSSRFSDI-VGPRDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXX--DHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            +DS RS   FSKS     S +FSSSRFS++ +   D E+E   RPLIL+NK PRWHEQLQCWCLNFRGRVTVASVKNFQL+                       + DK+ILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC
Sbjct:  297 DDSFRSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 444          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 4.561e-42
Identity = 95/172 (55.23%), Postives = 106/172 (61.63%), Query Frame = 1
Query:    4 EDSLRSFSKSI------DVSTEFSSSRFSDIVG--------PRDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLI------------------XXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            E+S RS + S       D ST+FSSSRFS+  G         +D +D  K+RPL+LRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLI                                       +HD +ILQFGKV KDMFTMDYRYPLSAFQAFAICL+SFDTKLAC
Sbjct:  290 EESFRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLAC 461          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.417e-37
Identity = 81/136 (59.56%), Postives = 95/136 (69.85%), Query Frame = 1
Query:   19 SFSKSIDVSTEFSSSRFS-DIVGPRDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            S SK  + + EFSS+  S D+ GP    +     PL+L+NKAPRWHEQLQCWCLNFRGRVTVASVKNFQL+                     + +K+ILQFGK+GKD+FTMDYRYPLSAFQAFAICL+SFDTK AC
Sbjct:  305 STSKGKEPAIEFSSTSLSADLSGPVCTNEV----PLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASVDPSLGIPAA---------EQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLTSFDTKPAC 427          
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.192e-36
Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 1
Query:   91 DEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423
            D     +D+PL+L+NK+PRWHEQLQCWCLNF+GRVTVASVKNFQL+                     +H+++ILQFGK+GKD+FTMDYRYPLSAFQAFAIC+SSFDTK AC
Sbjct:  291 DNSPSLRDQPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDASLDAPPE---------EHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPAC 392          
The following BLAST results are available for this feature:
BLAST of CK933152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
TLP14_ORYSJ1.370e-4667.59Tubby-like F-box protein 14 OS=Oryza sativa subsp.... [more]
TLP8_ORYSJ5.756e-4565.10Tubby-like F-box protein 8 OS=Oryza sativa subsp. ... [more]
TLP3_ORYSJ2.857e-4466.20Tubby-like F-box protein 3 OS=Oryza sativa subsp. ... [more]
TLP12_ORYSJ6.364e-4460.76Tubby-like F-box protein 12 OS=Oryza sativa subsp.... [more]
TLP13_ORYSJ1.852e-4363.40Tubby-like F-box protein 13 OS=Oryza sativa subsp.... [more]
TLP1_ARATH2.418e-4359.63Tubby-like F-box protein 1 OS=Arabidopsis thaliana... [more]
TLP10_ARATH5.387e-4364.19Tubby-like F-box protein 10 OS=Arabidopsis thalian... [more]
TLP7_ORYSJ4.561e-4255.23Tubby-like F-box protein 7 OS=Oryza sativa subsp. ... [more]
TLP5_ORYSJ4.417e-3759.56Tubby-like F-box protein 5 OS=Oryza sativa subsp. ... [more]
TLP2_ARATH2.192e-3663.06Tubby-like F-box protein 2 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_H06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933152 ID=CK933152; Name=CK933152; organism=Citrus sinensis; type=EST; length=452bp
GGGGAAGACTCGTTGCGGAGCTTCTCAAAATCAATTGACGTTTCAACCGA
ATTTAGCAGCTCACGGTTCTCCGATATTGTTGGACCCCGTGATGAAGAAG
ATGAGGGAAAGGATAGACCCCTGATTCTTCGGAATAAGGCACCAAGATGG
CATGAACAACTGCAGTGTTGGTGCCTCAACTTCCGTGGGAGGGTGACTGT
TGCATCAGTCAAGAATTTCCAGCTGATTGCTGCAACTCAGCCTGCAGCTG
GTGCGCCCACACCATCGCAGCCACCCCCGCCGCCCCCGTCAGATCACGAT
AAGATTATTCTGCAATTTGGCAAAGTTGGTAAGGATATGTTCACAATGGA
TTACCGGTATCCTCTGTCTGCATTTCAGGCTTTTGCGATCTGCTTGAGTA
GTTTCGACACCAAATTGGCATGTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
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