CK933152
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.370e-46 Identity = 98/145 (67.59%), Postives = 105/145 (72.41%), Query Frame = 1 Query: 19 SFSKS--IDVSTEFSSSRFSDIV--GPR------DEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 SFSKS +D S FSSSR+SDI GP + DE K+RPLILRNKAPRWHEQLQCWCLNF+GRVTVASVKNFQL+ DHDK+ILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLAC Sbjct: 300 SFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 444
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 5.756e-45 Identity = 97/149 (65.10%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 10 SLRSFSKS--------IDVSTEFSSSRFSDIVGPR---DEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 S SFSKS S +FSS+RFSDI G DEE + K+RPL+LRNKAPRWHEQLQCWCLNFRGRVT+ASVKNFQLI + DKIILQFGKV KDMFTMDYRYPLSAFQAFAICLSSFDTKLAC Sbjct: 298 STTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLI--AAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 444
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 2.857e-44 Identity = 94/142 (66.20%), Postives = 104/142 (73.24%), Query Frame = 1 Query: 10 SLRSFSKSI-DVSTEFSSSRFSDIVGP---RDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 S SFSKSI D S +FSS+RFSDI G D+ E K+RPL+LRNK PRWHEQLQCWCLNFRGRVT+ASVKNFQL+ D +K+ILQFGKV +DMFTMDYRYPLSAFQAFAICLSSFDTKLAC Sbjct: 308 STTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLV--AAPSPPPAGAPTPSQPGPADPEKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 447
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 6.364e-44 Identity = 96/158 (60.76%), Postives = 106/158 (67.09%), Query Frame = 1 Query: 4 EDSLRSFSKS-----IDVSTEFSSSRFSDIVGP-----RDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXX--------DHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 E+S RS + S +D S +FSSSRFS+I G D+ E K+RPL+LRNK PRWHEQLQCWCLNFRGRVTVASVKNFQLI DH K+ILQFGKVGKDMFTMDYRYPLSAFQAFAICL+SFDTKLAC Sbjct: 293 EESFRSTNTSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLAC 450
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.852e-43 Identity = 97/153 (63.40%), Postives = 107/153 (69.93%), Query Frame = 1 Query: 4 EDSLRS--FSKS--IDVSTEFSSSRFSDIV---GPR------DEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 E S RS FSKS +D S FSS++FSDI GPR +++E K+ PLIL+NKAPRWHEQLQCWCLNFRGRVTVASVKNFQLI +HDK+ILQFGKV KDMFTMDY YPLSAFQAFAI LSSFDTKLAC Sbjct: 287 ESSFRSVSFSKSSVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLAC 439
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.418e-43 Identity = 96/161 (59.63%), Postives = 108/161 (67.08%), Query Frame = 1 Query: 4 EDSLRSFSKS------IDVSTEFSSSRFSDIVGPRDEE-----DEGKDR---PLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXD-------HDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 ++S RS + S D S +FSS+RFSDI+GP E+ +EGK+R PL+L+NK PRWHEQLQCWCLNFRGRVTVASVKNFQLI DKIILQFGKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLAC Sbjct: 294 DESFRSITSSSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLAC 454
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 5.387e-43 Identity = 95/148 (64.19%), Postives = 105/148 (70.95%), Query Frame = 1 Query: 4 EDSLRS---FSKSI--DVSTEFSSSRFSDI-VGPRDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXX--DHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 +DS RS FSKS S +FSSSRFS++ + D E+E RPLIL+NK PRWHEQLQCWCLNFRGRVTVASVKNFQL+ + DK+ILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC Sbjct: 297 DDSFRSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 444
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.561e-42 Identity = 95/172 (55.23%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 4 EDSLRSFSKSI------DVSTEFSSSRFSDIVG--------PRDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLI------------------XXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 E+S RS + S D ST+FSSSRFS+ G +D +D K+RPL+LRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLI +HD +ILQFGKV KDMFTMDYRYPLSAFQAFAICL+SFDTKLAC Sbjct: 290 EESFRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLAC 461
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 4.417e-37 Identity = 81/136 (59.56%), Postives = 95/136 (69.85%), Query Frame = 1 Query: 19 SFSKSIDVSTEFSSSRFS-DIVGPRDEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 S SK + + EFSS+ S D+ GP + PL+L+NKAPRWHEQLQCWCLNFRGRVTVASVKNFQL+ + +K+ILQFGK+GKD+FTMDYRYPLSAFQAFAICL+SFDTK AC Sbjct: 305 STSKGKEPAIEFSSTSLSADLSGPVCTNEV----PLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASVDPSLGIPAA---------EQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLTSFDTKPAC 427
BLAST of CK933152 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.192e-36 Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 1 Query: 91 DEEDEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 423 D +D+PL+L+NK+PRWHEQLQCWCLNF+GRVTVASVKNFQL+ +H+++ILQFGK+GKD+FTMDYRYPLSAFQAFAIC+SSFDTK AC Sbjct: 291 DNSPSLRDQPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDASLDAPPE---------EHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPAC 392 The following BLAST results are available for this feature:
BLAST of CK933152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933152 ID=CK933152; Name=CK933152; organism=Citrus sinensis; type=EST; length=452bpback to top |