CK933157

Overview
NameCK933157
Unique NameCK933157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTV+MQS I+DVI+PAGW+EW GNFAL+TLFY E+QN GAGA TS RVKW  F+VITSA EAQ +T  +FIAGS+WLGSTGFPFSLGL
Sbjct:  496 SRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 65/89 (73.03%), Postives = 78/89 (87.64%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTV+MQS I+D+I+PAGW+EW GNFAL+TLFY E+QN+GAGA TS RVKW  F+VITSA EAQ +T  +FIAGS+WLGSTGFPFSLGL
Sbjct:  496 SRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.665e-34
Identity = 66/89 (74.16%), Postives = 73/89 (82.02%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTV+MQS I+DVI PAGW+EW+GNFALDTLFY EY NTGAGA TS RVKW   KVITS+ EAQ YT   FIAG +WL STGFPFSLGL
Sbjct:  495 SRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.224e-31
Identity = 63/89 (70.79%), Postives = 73/89 (82.02%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTVVMQS I++VINPAGW+ W GNFALDTL+Y EYQNTGAGA TS RV W  FKVITS+ EAQ +T  +FIAG +WL +T FPFSLGL
Sbjct:  231 SRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            ++TV+MQS ISDVI P GW EW+G FAL+TL Y EY NTGAGA T+NRVKW  FKVIT+AAEAQ YTA  FI G  WL STGFPFSLGL
Sbjct:  504 SQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.036e-30
Identity = 62/89 (69.66%), Postives = 69/89 (77.53%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTV+MQSDISDVI P GW+EWSG+FALDTL Y EY N G GA T+NRVKW  +KVITS  EAQ +TA  FI G  WL STGFPFSL L
Sbjct:  499 SRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.494e-25
Identity = 48/89 (53.93%), Postives = 68/89 (76.40%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTV +++ +  +INPAGW EWSG+FAL+TL+YAEY NTG G+ T+NRVKW  + V+TS ++   +T  NFIAG++WL +T  PF+ GL
Sbjct:  422 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24
Identity = 52/89 (58.43%), Postives = 64/89 (71.91%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTVVM+S ISDVI+PAGW EW  +FAL TLFY EY+N G G+ TS RVKW  + VITS   A+ +T A  I G +WLGSTG  ++ GL
Sbjct:  455 SRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.092e-23
Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTV MQ+ +SD INP GW EW+GNFALDTL+Y EY N+G GA    RVKW  + V+ ++AEA  +T +  I G+ WL STG  F  GL
Sbjct:  437 SRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.356e-22
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            +RTV M++ +  +I+P GW EW GNFAL TLFYAE+QNTG GA TS RV W  F+V+ SA+EA  +T   F+AG +W+ S+  PF+ GL
Sbjct:  424 SRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511          
The following BLAST results are available for this feature:
BLAST of CK933157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
PME3_CITSI2.017e-3474.16Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI3.441e-3473.03Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC7.665e-3474.16Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME_DAUCA1.224e-3170.79Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME3_ARATH2.087e-3171.91Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME2_ARATH1.036e-3069.66Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME2_CITSI8.494e-2553.93Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME1_FICAW5.506e-2458.43Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME32_ARATH2.092e-2353.93Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME17_ARATH1.356e-2253.93Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_H11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933157 ID=CK933157; Name=CK933157; organism=Citrus sinensis; type=EST; length=559bp
GGGCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAACCCA
GCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATTGTTTTA
TGCAGAGTATCAAAACACAGGTGCTGGTGCTGACACATCGAATAGGGTGA
AATGGAGCACATTCAAGGTGATTACTAGTGCAGCTGAGGCTCAAACTTAT
ACAGCTGCGAATTTTATTGCAGGGAGTACTTGGCTTGGCTCCACTGGGTT
TCCTTTCTCTCTTGGTCTGTGAATTTGTCATACATAGGCCATAGCTAAGC
TCAGCTGCCTATAAATGTCCTAGCTAGCAATAAATAACACTTGCTCCGCT
AGATGTTTGATGATTTTATTTGTGCGAGTCTGCTCAAGTTTGATGATTTT
ATTTGTGTGAGTCTGCTCGAGTTTGATGTAAGAGATTTATCTCAGCAGGG
AATTATGGATGATGATTGCATGCGTTGCTCCCTAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGAAAAAAAAAAAAAAAAA
AAAAAAAAA
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