CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.482e-78
Identity = 145/177 (81.92%), Postives = 165/177 (93.22%), Query Frame = 3
Query:  237 QTPATAMRGAEADAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            QT  +A+RGAE+D MGLL RERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LF+NSPGGSLSATMAIYDVVQLVRADVST+ALG++ASTAS+ILG GTKGKRFAMPNTR+MIHQP+GGASGQ +DVEIQA+E+MHNK+N T II+G T RSFEQV KDIDRDRYMSPIEAVEY
Sbjct:   67 QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEY 243          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.685e-48
Identity = 93/188 (49.47%), Postives = 134/188 (71.28%), Query Frame = 3
Query:  216 VPLSSAPQTPATAM---RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            +P+S+    P       RG  A D    L RERI+FLG  +DD VADA+++Q+L L+A+DP KDI+++VNSPGGS++A +AIYD +Q V  DV T+  G++AS  + +L GGTKGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI+  K+    +++  TG+  +++ +D DRD ++SP EAVEY
Sbjct:    1 MPISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEY 188          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.685e-48
Identity = 89/171 (52.05%), Postives = 129/171 (75.44%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L RERI+FLG  +DD VADA+++Q+L L+A+DP KDI++++NSPGGS++A +AIYD +Q V  DV T+  G++AS  + +L GGTKGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI++ K+    +++  TG+  +++ +D DRD ++SP EAVEY
Sbjct:   18 RGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEY 188          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.875e-48
Identity = 91/179 (50.84%), Postives = 127/179 (70.95%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P       RG  A D    L ++RI+FLG+ IDD VA+ +I+Q+L L+A+DP KDI L++NSPGGS+SA MAI+D +Q +R DVST+ +G++AS  + +L  G KGKRFA+PN+ +MIHQPMGG  GQ +D+EI A+ I+  +DN  RI+S  TG+  EQ+ +D DRD +M+  EA EY
Sbjct:    6 PMVVEQTSRGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREY 184          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMA (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus GN=clpP3 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.875e-48
Identity = 91/189 (48.15%), Postives = 137/189 (72.49%), Query Frame = 3
Query:  213 DVPLSSAPQTPAT---AMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D+P S     P     + RG  A D    L RERI+FLG +++D +ADA+++Q+L L+A+DP KDI+L++NSPGGS++A +AIYD +Q V  D+ T+  G++AS  + +L GG+KGKR A+PN+R+MIHQP+GGA GQ +++EIQA+EI+  K+    +++  TG+S E++ +D DRD ++SP EAVEY
Sbjct:   17 DLPCSGPGVLPTVIEQSGRGERAFDIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHFLSPQEAVEY 205          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMT (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.903e-48
Identity = 86/165 (52.12%), Postives = 128/165 (77.58%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L RERI+FLG +++D VADA+++Q+L L+A DP KDI+L+VNSPGGS++A +AIYD +Q V  DV T+  G++AS  + +L GGTKGKR A+PN+R+MIHQP+GGA GQ +++EIQA+EI++ K+    +++  TG++ +++ +D DRD ++SP EAVEY
Sbjct:   17 DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEY 181          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.364e-48
Identity = 91/171 (53.22%), Postives = 127/171 (74.27%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L RERIVFLG  +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS++A MAIYD +Q V  DV+T+  G++AS  + +L GG +GKR A+P+ R+MIHQP+GGA GQ +D+EIQAREI+++K     +++  TG+  E+++ D DRD +MSP EA  Y
Sbjct:   47 RGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAY 217          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.364e-48
Identity = 91/171 (53.22%), Postives = 127/171 (74.27%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L RERIVFLG  +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS++A MAIYD +Q V  DV+T+  G++AS  + +L GG +GKR A+P+ R+MIHQP+GGA GQ +D+EIQAREI+++K     +++  TG+  E+++ D DRD +MSP EA  Y
Sbjct:   47 RGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAY 217          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNPX (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.863e-47
Identity = 90/189 (47.62%), Postives = 134/189 (70.90%), Query Frame = 3
Query:  213 DVPLSSAPQTPATAM---RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++P+S+    P       RG  A D    L RERI+FLG  +DD VADA+++Q+L L+A+DP KDI++++NSPGGS++A +AIYD +Q V  DV T+  G++AS  + +L GG KGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI+  K+    +++  TG+  +++ +D DRD ++SP EAV+Y
Sbjct:   17 EMPISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSPAEAVQY 205          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMM (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.863e-47
Identity = 92/187 (49.20%), Postives = 133/187 (71.12%), Query Frame = 3
Query:  219 PLSSA---PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P+SS    P     + RG  A D    L RERI+FLG  +DD VADA+++Q+L L+A+DP KDI++++NSPGGS++A +AIYD +Q V  DV T+  G++AS  + +L GGTKGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI+  K+    +++  TG+   ++ +D DRD ++SP +AVEY
Sbjct:   19 PVSSPGILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEY 205          
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP4_ARATH3.482e-7881.92ATP-dependent Clp protease proteolytic subunit 4, ... [more]
CLPP2_SYNS91.685e-4849.47ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP1_SYNSC1.685e-4852.05ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_MOOTA2.875e-4850.84ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_PROMA2.875e-4848.15ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_PROMT4.903e-4852.12ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_SYNP68.364e-4853.22ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNE78.364e-4853.22ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP1_SYNPX1.863e-4747.62ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_PROMM1.863e-4749.20ATP-dependent Clp protease proteolytic subunit 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
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