CK933179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.970e-54 Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 2 Query: 74 MVKGRQGERVRLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 MVKGRQGERVRLYVRGTILGYKRSKSNQ PNTSL+QVEGVNT EEV+WY GKR+AYI+KAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 5.066e-54 Identity = 100/112 (89.29%), Postives = 105/112 (93.75%), Query Frame = 2 Query: 74 MVKGRQGERVRLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 MVKGRQGERVRLYVRGTILGYKRSKSNQ PNTSL+Q+EGVNT+EEV WY GKR+AYI+KAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 9.554e-53 Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 2 Query: 77 VKGRQGERVRLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 +KGRQGERVRLYVRGT+LGYKRSKSNQ PNTSLIQ+EGVNT+EEV WY GKRLAYI+KAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.248e-52 Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 2 Query: 77 VKGRQGERVRLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 +KGRQGERVRLYVRGT+LGYKRSKSNQ PNTSL+Q+EGVNT+EEV WY GKRLAYI+KAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae GN=RPL33B PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.143e-28 Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 2 Query: 95 ERVRLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 E RLYV+G L Y+RSK PN SLI++EGV T +E +Y GKR+AY+++A + GS R +WGKV R+HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: RL33A_YEAST (60S ribosomal protein L33-A OS=Saccharomyces cerevisiae GN=RPL33A PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 4.775e-28 Identity = 58/105 (55.24%), Postives = 77/105 (73.33%), Query Frame = 2 Query: 95 ERVRLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 E RLYV+G L Y+RSK PN SLI++EGV T ++ +Y GKR+AY+++A + GS R +WGKV R+HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: RL33A_SCHPO (60S ribosomal protein L33-A OS=Schizosaccharomyces pombe GN=rpl33a PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 6.453e-25 Identity = 52/102 (50.98%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 104 RLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 RLYV+ L ++RSK P TSL+++EG ++KEE +Y GKR+ +++K+ GS R IWG V+R HGNSGVVRA+F NLPPK+ G +RV +YPSN+ Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: RL35A_DICDI (60S ribosomal protein L35a OS=Dictyostelium discoideum GN=rpl35a PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.428e-25 Identity = 50/103 (48.54%), Postives = 79/103 (76.70%), Query Frame = 2 Query: 104 RLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHK-AKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 ++Y +G +LGY+RS++ Q PN SLI++EGV ++E+ +Y GK++ + K +K+ KN + ++ WGK+ ++HG+SGVV+A+F NLPPK+MG VRV +YPSNI Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGHKISWGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: RL35A_XENLA (60S ribosomal protein L35a OS=Xenopus laevis GN=rpl35a PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.101e-24 Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 2 Query: 104 RLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 RL+ + T GYKR NQ +T+L+++EGV ++E +Y GKR AY++KAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWCKATFAGYKRGLRNQREHTALLKIEGVYARDETEFYFGKRCAYVYKAKNNTVTPGGKPNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
BLAST of CK933179 vs. ExPASy Swiss-Prot
Match: RL35A_ICTPU (60S ribosomal protein L35a OS=Ictalurus punctatus GN=rpl35a PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.438e-24 Identity = 55/107 (51.40%), Postives = 74/107 (69.16%), Query Frame = 2 Query: 104 RLYVRGTILGYKRSKSNQCPNTSLIQVEGVNTKEEVAWYCGKRLAYIHKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 RL+ + GYKR NQ +T+L++VEGV ++ EV +Y GKR AY++KAK + R IWGKV R+HGNSG+VRAKF SNLPPK++G R+RV +YPS + Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKVEGVYSRNEVDFYLGKRCAYVYKAKKTTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFTSNLPPKAIGHRIRVMLYPSRV 110 The following BLAST results are available for this feature:
BLAST of CK933179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933179 ID=CK933179; Name=CK933179; organism=Citrus sinensis; type=EST; length=633bpback to top |