CK933923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_XENTR (Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ I S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ G+ +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S + ++VPE + G L +N+ +D VAG++F AHK +LAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_PONAB (Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ I S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ G+ +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S + ++VPE + G L +N+ +D VAG++F AHK +LAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_MOUSE (Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ I S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ G+ +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S + ++VPE + G L +N+ +D VAG++F AHK +LAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_HUMAN (Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ I S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ G+ +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S + ++VPE + G L +N+ +D VAG++F AHK +LAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_BOVIN (Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ I S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ G+ +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S + ++VPE + G L +N+ +D VAG++F AHK +LAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOPB_XENLA (Speckle-type POZ protein B OS=Xenopus laevis GN=spop-B PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ I S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ G+ +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S + ++VPE + G L +N+ +D VAG++F AHK +LAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLSDELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOPA_XENLA (Speckle-type POZ protein A OS=Xenopus laevis GN=spop-A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ I S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ G+ +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S + ++VPE + G L +N+ +D VAG++F AHK +LAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: RDX_DROME (Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.978e-18 Identity = 65/212 (30.66%), Postives = 110/212 (51.89%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCSRFHSI---QVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ + S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ + +++ES +G WG+K+F RR L E + L +D L I C V VV +++ S +I +VPE + G L DN + SD+T V G +F AHK +LAARS +F + F Sbjct: 483 KVVKFSYMWTINNFSFCREE-MGEVLKSSTFSAGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMF 684
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_DANRE (Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.132e-17 Identity = 63/212 (29.72%), Postives = 113/212 (53.30%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ I S F+ G +W + P G + E++ Y+S+++ L S ++VRA F+ ++L+ G+ +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S + ++VP+ + G L +++ +D + VAG++F AHK +LAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMF 229
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOPL_HUMAN (Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.931e-17 Identity = 65/212 (30.66%), Postives = 110/212 (51.89%), Query Frame = 3 Query: 177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785 + V S+ + I +S + +G+ + S F+ G +W + P G + E Y+S+++ L S ++VRA F+ +LL+ + +++ES +G WG+K+F RR L E + L DD L + C V VV +++ S ++++VPE + G L +N +D +F V G++F AHK VLAARSP+F + F Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKD-YLSLYLLLVSCPKSEVRAKFKFSLLNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGHTNTNTLKVPECRLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSPVFNAMF 229 The following BLAST results are available for this feature:
BLAST of CK933923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933923 ID=CK933923; Name=CK933923; organism=Citrus sinensis; type=EST; length=790bpback to top |