CK933923

Overview
NameCK933923
Unique NameCK933923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_XENTR (Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ I S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+  G+          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L +N+  +D    VAG++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_PONAB (Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ I S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+  G+          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L +N+  +D    VAG++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_MOUSE (Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ I S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+  G+          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L +N+  +D    VAG++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_HUMAN (Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ I S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+  G+          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L +N+  +D    VAG++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_BOVIN (Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ I S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+  G+          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L +N+  +D    VAG++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOPB_XENLA (Speckle-type POZ protein B OS=Xenopus laevis GN=spop-B PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ I S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+  G+          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L +N+  +D    VAG++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLSDELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOPA_XENLA (Speckle-type POZ protein A OS=Xenopus laevis GN=spop-A PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ I S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+  G+          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L +N+  +D    VAG++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: RDX_DROME (Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.978e-18
Identity = 65/212 (30.66%), Postives = 110/212 (51.89%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCSRFHSI---QVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ + S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+   +          +++ES       +G  WG+K+F RR  L  E +  L +D L I C V VV  +++ S   +I   +VPE  +    G L DN + SD+T  V G +F AHK +LAARS +F + F
Sbjct:  483 KVVKFSYMWTINNFSFCREE-MGEVLKSSTFSAGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMF 684          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOP_DANRE (Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.132e-17
Identity = 63/212 (29.72%), Postives = 113/212 (53.30%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ I S  F+ G     +W +   P G + E++  Y+S+++ L S   ++VRA F+ ++L+  G+          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VP+  +    G L +++  +D +  VAG++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLD-EESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOPL_HUMAN (Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.931e-17
Identity = 65/212 (30.66%), Postives = 110/212 (51.89%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ + S  F+ G     +W +   P G + E    Y+S+++ L S   ++VRA F+ +LL+   +          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     ++++VPE  +    G L +N   +D +F V G++F AHK VLAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKD-YLSLYLLLVSCPKSEVRAKFKFSLLNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGHTNTNTLKVPECRLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSPVFNAMF 229          
The following BLAST results are available for this feature:
BLAST of CK933923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
SPOP_XENTR2.280e-1830.66Speckle-type POZ protein OS=Xenopus tropicalis GN=... [more]
SPOP_PONAB2.280e-1830.66Speckle-type POZ protein OS=Pongo abelii GN=SPOP P... [more]
SPOP_MOUSE2.280e-1830.66Speckle-type POZ protein OS=Mus musculus GN=Spop P... [more]
SPOP_HUMAN2.280e-1830.66Speckle-type POZ protein OS=Homo sapiens GN=SPOP P... [more]
SPOP_BOVIN2.280e-1830.66Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=... [more]
SPOPB_XENLA2.280e-1830.66Speckle-type POZ protein B OS=Xenopus laevis GN=sp... [more]
SPOPA_XENLA2.280e-1830.66Speckle-type POZ protein A OS=Xenopus laevis GN=sp... [more]
RDX_DROME2.978e-1830.66Protein roadkill OS=Drosophila melanogaster GN=rdx... [more]
SPOP_DANRE1.132e-1729.72Speckle-type POZ protein OS=Danio rerio GN=spop PE... [more]
SPOPL_HUMAN1.931e-1730.66Speckle-type POZ protein-like OS=Homo sapiens GN=S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_E08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933923 ID=CK933923; Name=CK933923; organism=Citrus sinensis; type=EST; length=790bp
GGGGGAAAAAGAGGGAAGGGGAAAAAAAAACCTAACTAAAATCTTCTGAA
CTTCCACTAATAAATTACTTGAAATTATTGAATAATCATAAAAATTCTTA
ACATTTCAATGAATCAGTAATGACGAATAGCAGCCCGAGCCCGCTGGTTT
CGCCAACGAGCTCCCGGTCAGTGACGGAAACCGTGAACGGATCGCACAAG
TTCGTGATTCAAGGGTACTCGTTAGCCAAAGGTATGGGAATCGGGAAGCA
CATTGCCAGCGACAATTTCACCGTGGGCGGCTACCAGTGGGCCATATATT
TTTATCCCGACGGTAAAAATCCGGAGGATAATTCAGCGTACGTGTCGGTT
TTTATTGCATTAGCGAGTGAAGGAACGGACGTAAGAGCATTGTTTGAGCT
GACGCTGTTGGATCAGAGTGGTAAAGGGAAGCACAAAGTGCATAGCCATT
TTGATCGATCGCTCGAGAGCGGTCCTTACACGCTCAAGTATCGTGGAAGC
ATGTGGGGATACAAGCGTTTTTTCAGACGAGCTATGCTTGAAACATCAGA
TTACCTCAAAGATGATTGCTTGAAAATCAATTGCACTGTTGGAGTTGTGG
TATCGGCTATAGACTGTTCACGGTTCCACTCAATTCAGGTCCCAGAGTCT
GATATAGGAGCACATTTTGGCATGCTACTAGACAATGCAGAAAGCTCTGA
CATCACTTTTGATGTAGCTGGGGAAAAATTTCCTGCTCATAAGTTGGTAT
TGGCTGCACGATCTCCAATATTTCGTTCTAAATTCTTTGA
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