CK933924

Overview
NameCK933924
Unique NameCK933924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1188 contig Csv1_Contig1188:1..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.067e-79
Identity = 147/239 (61.51%), Postives = 172/239 (71.97%), Query Frame = 1
Query:  106 GSAQNCG---SGVVCPGGECCSRFGWCGLTTDYCCE--GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVII 789
            GSA+ CG    G +CPGG CCS+FGWCG T DYC +  GCQS C+           G+ GD G L  +I+R+ F+ +L +RND  CPAR FYTYDAFI AAK+FPAF  +G++  RKRE+AAF AQT HETTGG  W  AP G Y WGYC+NRE+  A  DYC  DPNYPC  GK Y+GRGP+QLTWN NY +CG A+GVD LNNPDLLATDP +SFKSA WFWMT Q PKPS H+VII
Sbjct:   19 GSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCS-----------GSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVII 243          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 2.198e-77
Identity = 142/235 (60.43%), Postives = 167/235 (71.06%), Query Frame = 1
Query:  109 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVII 789
            SA+ CGS   G  CP G CCS+FGWCG T DYC  G CQS C     G   P   T   GG+LG IIS  MF+ +L++RND  C  + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW  AP G YAWGYC+ RE G +  DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVD LNNPDL+ATDPV+SFKSA+WFWMT Q PKPS H+VII
Sbjct:   22 SAEQCGSQAGGARCPSGLCCSKFGWCGNTNDYCGPGNCQSQCP----GGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVII 251          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.870e-77
Identity = 136/234 (58.12%), Postives = 166/234 (70.94%), Query Frame = 1
Query:  106 GSAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            GSA+ CG    G VCPGG CCS+FGWCG T DYC  GCQS C+                 G++G++I+R MF D+L++RN+  CP + FYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT HETTGGW  AP G YAWGYC+ RE G+  + YC P+  +PC    KYYGRGPIQ+++N NY + G+A+GVD +NNPDL+ATD V+SFK+A WFWMT Q PKPS H VI
Sbjct:   18 GSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSST---------------GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVI 235          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 8.351e-77
Identity = 145/238 (60.92%), Postives = 168/238 (70.59%), Query Frame = 1
Query:  106 GSAQNCG---SGVVCPGGECCSRFGWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVII 789
            GSA+ CG    G +CPGG CCS+FGWCG T DYC   GCQS C+           G A   G L  +ISR+ F  +L +RND  CPAR FYTYDAFI AA++FPAF  +G++  RKREIAAF AQT HETTGG  W  AP G YAWGYC+NRE+   SS YC  DPNYPC  GK Y+GRGP+QL+WN NY +CG A+GVD LNNPDLL++DP +SFKSA WFWMT Q PKPS H VII
Sbjct:   20 GSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVII 246          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.425e-76
Identity = 133/229 (58.08%), Postives = 160/229 (69.87%), Query Frame = 1
Query:  115 QNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            + CG    G +CPGG CCS+FGWCG TTDYC  GCQS C            G +    +L  +ISR  F+ +L++RND  CPA+ FYTYDAFI AAKA+P+FGN+G+   RKREIAAF  QT HETTGGW  AP G YAWGYCF RE   ++     P +PC    +YYGRGPIQ++WN NY +CG A+GVD LN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI
Sbjct:   28 EQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCG-----------GPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVI 245          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 285.804 bits (730), Expect = 1.860e-76
Identity = 136/234 (58.12%), Postives = 164/234 (70.09%), Query Frame = 1
Query:  109 SAQNCG---SGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            SA+ CG    G +CP G CCS FGWCG T  YC + GCQS        +C P     G  G+L  IIS   F+D+L++RND  CPAR FYTY+AFI AAK+FP FG +G+   RK+E+AAFF QT HETTGGW  AP G Y+WGYCF +E   A SDYC+P+  +PC    +YYGRGP+QL+WN NY  CG A+GVD LNNPDL+A D V++FK+AIWFWMTAQPPKPS H VI
Sbjct:   32 SAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQS--------QCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVI 256          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.860e-76
Identity = 131/231 (56.71%), Postives = 163/231 (70.56%), Query Frame = 1
Query:  109 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            SA+ CG+   G +CPGG CCS+FGWCG T++YC +GCQS C+           G++G GG L  +IS   F ++L++RND  C  + FYTYDAF+ AAKAFP F N G+   +KREIAAF  QT HETTGGWP AP G YAWGYCF RE   ++       +PC    +YYGRGPIQ++WN NY +CG A+GVD LNNPDL+ATDPV+SFK+A+WFWMT Q PKPS H+VI
Sbjct:   19 SAEQCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCS-----------GSSG-GGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVI 237          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.145e-76
Identity = 140/235 (59.57%), Postives = 165/235 (70.21%), Query Frame = 1
Query:  109 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVII 789
            SA+ CGS   G  C  G CCS+FGWCG T DYC  G CQS C         P   T   GG+LG IIS  MF+ +L++RND  C  + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW  AP G YAWGYC+ RE G +  DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVD LNNPDL+ATDPV+SFKSA+WFWMT Q PKPS H+VII
Sbjct:   22 SAEQCGSQAGGARCASGLCCSKFGWCGNTNDYCGPGNCQSQC---------PGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVII 246          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.070e-76
Identity = 132/229 (57.64%), Postives = 160/229 (69.87%), Query Frame = 1
Query:  115 QNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            + CG    G +CPGG CCS+FGWCG TTDYC + CQS C            G +    +L  +ISR  F+ +L++RND  CPA+ FYTYDAFI AAKA+P+FGN+G+   RKREIAAF  QT HETTGGW  AP G YAWGYCF RE   ++     P +PC    +YYGRGPIQ++WN NY +CG A+GVD LN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI
Sbjct:   27 EQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCG-----------GPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVI 244          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.575e-75
Identity = 139/235 (59.15%), Postives = 164/235 (69.79%), Query Frame = 1
Query:  112 AQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTA-GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVII 789
            AQNCGS   G  C  G+CCS+FGWCG T DYC  G CQS C         P  G   G GG+LG  IS  MF+ +L++RN+  C  + FY+Y+AFI AA++FP FG SG+   RKREIAAFFAQT HETTGGW  AP G YAWGYCF RE G    DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVD LNNPDL+ATDPV+SFK+A+WFWMT Q PKPS H+VII
Sbjct:   26 AQNCGSQGGGKACASGQCCSKFGWCGNTNDYCGSGNCQSQC---------PGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERG-NPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVII 250          
The following BLAST results are available for this feature:
BLAST of CK933924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI1_THECC3.067e-7961.51Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHI1_TOBAC2.198e-7760.43Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHIB_VITVI2.870e-7758.12Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHI1_GOSHI8.351e-7760.92Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIT_PHAVU1.425e-7658.08Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHIB_ARATH1.860e-7658.12Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI2_PEA1.860e-7656.71Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI2_TOBAC4.145e-7659.57Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHI5_PHAVU7.070e-7657.64Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHIT_SOLTU1.575e-7559.15Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_E09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933924 ID=CK933924; Name=CK933924; organism=Citrus sinensis; type=EST; length=794bp
GGGGACACCAAGCAGAGGATAATTGATATCATAACTGTTGCTTTCAAAAT
GAGGCTTATTGGGTCCTTACTAATTTTCTCTCTGGTTTTATCTTTTGTAC
TAGGAGGCTCAGCACAGAACTGTGGAAGCGGCGTTGTGTGCCCAGGAGGG
GAGTGTTGTAGTCGATTTGGTTGGTGTGGCCTAACAACAGACTACTGTTG
TGAAGGCTGCCAAAGTAACTGTAATCAGGTTGTTTGCGGTGAATGTGATC
CCGACGACGGGACGGCTGGCGATGGCGGTGAACTGGGCAAGATCATCTCA
AGGAAGATGTTTGAAGACTTGCTTGAGTATAGAAATGATAAACGATGCCC
TGCCAGATGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCAAAGCTT
TTCCAGCCTTTGGTAATTCTGGAAATGAAACCATGCGTAAAAGAGAAATT
GCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCCGA
TGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTAATAGGGAAGTTG
GTGCTGCGTCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAG
TACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTGCAATTACTTAAG
GTGCGGAGAAGCCTTGGGGGTGGACTGGTTGAACAATCCAGACCTACTTG
CCACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGATGACC
GCACAGCCACCAAAGCCATCGTGGCACGAAGTCATTATCGACGA
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