CK933928

Overview
NameCK933928
Unique NameCK933928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933928 vs. ExPASy Swiss-Prot
Match: Y2433_ARATH (Uncharacterized protein At2g24330 OS=Arabidopsis thaliana GN=At2g24330 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.058e-37
Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 3
Query:  405 EMAEDKSVTES--ENKDSAASSAVVGKK----RKGIISRIWNGIFRLKRDDFEKRLQYISKEEAAVLARMKRRSQTWRRLTGHLIIFSVIFEVIAVGYAIMTTRSVDLDWKMRALRVLPMFLLPAFSSLAYSAFVSFTRICDRKD 821
            E   + +V ES  E  DSA   +  G+K    RKG+ SR+WN IFR++ DDFEKRL+ ISKEEA V  RMKRRS T R    +LI FSV FEVIAV YAIMTTR  DLDWK+R+ R+LPMFLLPA + L YS+ V F R+CDR+D
Sbjct:    5 EKEHEGTVVESGGEKNDSAVVLSASGEKKTTKRKGLFSRLWNAIFRVRGDDFEKRLKNISKEEATVRNRMKRRSITRRNFIRNLIAFSVFFEVIAVSYAIMTTRDEDLDWKLRSFRILPMFLLPAVAFLLYSSLVGFWRMCDRRD 149          
The following BLAST results are available for this feature:
BLAST of CK933928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2433_ARATH1.058e-3758.62Uncharacterized protein At2g24330 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionCGF1004543_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933928 ID=CK933928; Name=CK933928; organism=Citrus sinensis; type=EST; length=821bp
GGGGGCATTTGCATAAGGGCGATTAATCATTTTATCATATTGGCAAATCA
CAACTGCAATCCATTCTCACCATCTCGCCAAAAGCTCTGAAATCACTCTT
ATCTCTCTCCCTCCCGCTTTGAAACTTTCTGTTGATCATTCTCCGCCAAC
CGTGAATCGTCGTTTGTTTTCTGATAATTTTTGTTTTTTCACTTCCGGAG
TCTTTTGTGGAAACAAGTGCGCGTGCTGATGTTAACTTTCAGGGTCAAAA
TCTTGGTTTGAAACTCACTCGATTCCAAATCAACAACTCCGGGCACTTGG
TGATCTTTGAGCTCTGGCATCAACAGGATTGCCTGGAAGTTACGCTCATT
TGCAGGTCTAATTGAGAGAAAAATAAAGGCAGTTGAGGAAGTGGAGCAAA
AGAAGAAATGGCAGAGGATAAAAGTGTTACTGAAAGCGAAAATAAAGATT
CTGCTGCTTCTTCAGCAGTAGTAGGAAAGAAGCGCAAGGGTATCATTTCC
CGAATTTGGAATGGTATCTTTAGATTAAAGAGGGATGATTTTGAGAAGAG
ATTGCAGTACATTTCTAAGGAAGAAGCTGCCGTTCTTGCTAGGATGAAAA
GGAGATCACAGACTTGGAGGAGGCTGACCGGGCATCTTATTATATTCTCT
GTTATTTTTGAGGTTATTGCAGTTGGTTATGCTATCATGACAACAAGATC
AGTAGATTTAGATTGGAAGATGAGGGCACTTCGAGTCTTGCCTATGTTTC
TTTTGCCTGCTTTTTCTTCTCTTGCTTATTCGGCATTTGTGAGCTTCACG
AGAATTTGCGATCGCAAGGAC
back to top