CK933929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LARP7_DANRE (La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 56/182 (30.77%), Postives = 99/182 (54.40%), Query Frame = 1 Query: 301 CEDPIKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKA 846 C D + +N L + KQVE++F D NL D++M ++I ++++G++ I+V+ +F ++K LT + I AL+ S+++ V+ G +++R PL T +D TV VE LP+ + ++R+F++ G + I I +Y+ +K AFVE+ET E A+KA Sbjct: 22 CADLSEKKDNEKKKRSRVKQLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGETP-KDVDSRTVYVELLPKTVTHIWLERVFSKCGHVVYISI------------PRYKSTRHSKGFAFVEFETQEQAQKA 190
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LARP7_MOUSE (La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 55/158 (34.81%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 373 IIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKA 846 I KQV+++F D NL DK++ I K+++G+V IS++ SF K+K+LT + I AL+ SS++ + G +++R PL +D + TV VE LP++ + ++R+F + G + I I Y+ K AFVE+ET E A KA Sbjct: 32 IAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI------------PHYKSTGDPKGFAFVEFETKEQAAKA 176
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LARP7_RAT (La-related protein 7 OS=Rattus norvegicus GN=Larp7 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.316e-17 Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 373 IIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKA 846 I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I AL+ SS++ + G +++R PL +D + TV VE LP++ + ++R+F + G + I I Y+ K AFVE+ET E A KA Sbjct: 33 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI------------PHYKSTGDPKGFAFVEFETKEQAAKA 177
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LARP7_MACFA (La-related protein 7 OS=Macaca fascicularis GN=LARP7 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.316e-17 Identity = 58/178 (32.58%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 313 IKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKA 846 ++ + S VL D I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I ALR S+++ + G +++R PL +D TV VE LP++ + ++R+F + G + I I Y+ K AFVE+ET E A KA Sbjct: 23 VEKKKRSRVKQVLAD-----IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLG-ERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISI------------PHYKSTGDPKGFAFVEFETKEQAAKA 182
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LARP7_HUMAN (La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.316e-17 Identity = 58/178 (32.58%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 313 IKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKA 846 ++ + S VL D I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I ALR S+++ + G +++R PL +D TV VE LP++ + ++R+F + G + I I Y+ K AFVE+ET E A KA Sbjct: 23 VEKKKRSRVKQVLAD-----IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLG-ERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISI------------PHYKSTGDPKGFAFVEFETKEQAAKA 182
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LARP7_XENTR (La-related protein 7 OS=Xenopus tropicalis GN=larp7 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17 Identity = 56/177 (31.64%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 316 KDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKA 846 KD E V L I KQV+++F D NL D+++ I K ++G++ IS++ASF K+K++T + I A++ SS++ ++ +G K++R PL + +D TV VE LP++ + ++R+F + G + + I +Y+ K AF+E+ET E A KA Sbjct: 23 KDREKKKRSRV--KQLLADIAKQVDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRRFPLG-EKPQDVDSRTVYVELLPKNVTHSWIERVFGKYGMVVYVSI------------PRYKSTGDPKGFAFIEFETQEQAAKA 184
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LARP6_HUMAN (La-related protein 6 OS=Homo sapiens GN=LARP6 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 54/183 (29.51%), Postives = 100/183 (54.64%), Query Frame = 1 Query: 355 DDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRD--------------PKLFTVLV---ENLPEDHSVENMQRIFAEAGKIKSICIRDP--NVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKA 846 ++L ++++ Q+E+YFSDENL D +++ +R+NK G+V + ++ SF+K+K LTR+ AL+ S +L ++ + +KV+R P+P+ + PKL+ + ++ +E++ ++F G I S+ I P + + ++ S V + A VE+E VEAA KA Sbjct: 90 EELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKPGRELPPDIRRISSRYSQVGTQECAIVEFEEVEAAIKA 272
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LARP6_MOUSE (La-related protein 6 OS=Mus musculus GN=Larp6 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16 Identity = 58/213 (27.23%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 304 EDPIKDHENSSTPAVLTD-------------DLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRD--------------PKLFTVLV---ENLPEDHSVENMQRIFAEAGKIKSICIRDP--NVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEKA 846 E+P + H +++T D +L ++++ Q+E+YFSDENL D +++ +R+NK G+V + ++ SF+K+K LTR+ AL+ S L ++ + +KV+R P+P+ + PKL+ + ++ +E++ ++F G I S+ I P + + ++ S V + A VE+E V+AA KA Sbjct: 60 EEPSRGHSSATTSGGENDREDLEPEWRPPDEELIRKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLHLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKPGRELPPDIRRISSRYSQVGTQECAIVEFEEVDAAIKA 272
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LAH1_YEAST (La protein homolog OS=Saccharomyces cerevisiae GN=LAH1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-15 Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 316 KDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKL----FTVLVENLPED--------HSVENMQRIFAEAGKIKSICIR 735 + NS T ++ R +KQVE+YFS+ N P D+++ KN +G+VPIS IA+F ++K+ R ++ ALR S +L VS++G+ VKR PL +T R+ ++ T+ V N P + EN++ F + G+I + +R Sbjct: 14 QSRRNSFAVIEFTPEVLDRCLKQVEFYFSEFNFPYDRFLRTTAEKN-DGWVPISTIATFNRMKKY-RPVDKVIEALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQENLEAFFKKLGEINQVRLR 163
BLAST of CK933929 vs. ExPASy Swiss-Prot
Match: LA_HUMAN (Lupus La protein OS=Homo sapiens GN=SSB PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13 Identity = 51/168 (30.36%), Postives = 92/168 (54.76%), Query Frame = 1 Query: 361 LKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRES--SLLVVSSNGKKVKRLNPLPVTEV-----RDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEYLVSNKLHAFVEYETVEAAEK 843 L+ +I Q+EYYF D NLP DK++ I K EG+VP+ ++ F +L RLT + IV AL +S L+ +S + K++R P+ EV D K +V ++ P D ++++++ + G++ +I +R + ++ K S FV ++++E+A+K Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQI-KLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMR--RTLHKAFKGS-----------IFVVFDSIESAKK 166 The following BLAST results are available for this feature:
BLAST of CK933929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933929 ID=CK933929; Name=CK933929; organism=Citrus sinensis; type=EST; length=846bpback to top |