CK933940

Overview
NameCK933940
Unique NameCK933940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig613 contig Csv1_Contig613:119..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 4.860e-66
Identity = 118/158 (74.68%), Postives = 132/158 (83.54%), Query Frame = 2
Query:    5 LDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 478
            LDIANAAIVIHL+GAYQV+CQPLFAFIEKQA  +FPDSEFI KDIK+PIPGFK   LN+FRL+WRT+FVI+TTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIP+WST+W+CLQ+ S+ CL                DLKSYKPF + Y
Sbjct:  319 LDIANAAIVIHLIGAYQVYCQPLFAFIEKQASIQFPDSEFIAKDIKIPIPGFKPLRLNVFRLIWRTVFVIITTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPRWSTRWVCLQVFSLGCLVVSIAAAAGSIAGVLLDLKSYKPFRSEY 476          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.797e-60
Identity = 107/158 (67.72%), Postives = 127/158 (80.38%), Query Frame = 2
Query:    5 LDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 478
            LDIAN AIVIHLVGAYQV+CQPLFAF+EK+A +RFP+SEF+TK+IK+ +   K +NLNLFRLVWRT FV+ TT+ISML+PFFNDVVGLLGA+GFWPLTVYFPVEMYIAQK +P+W TKW+CLQ+LSV CL                DLK YKPF + +
Sbjct:  323 LDIANLAIVIHLVGAYQVYCQPLFAFVEKEASRRFPESEFVTKEIKIQLFPGKPFNLNLFRLVWRTFFVMTTTLISMLMPFFNDVVGLLGAIGFWPLTVYFPVEMYIAQKNVPRWGTKWVCLQVLSVTCLFVSVAAAAGSVIGIVSDLKVYKPFQSEF 480          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.047e-56
Identity = 102/159 (64.15%), Postives = 128/159 (80.50%), Query Frame = 2
Query:    5 LDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKC-YNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 478
            LDIANAAIV+HLVGAYQVF QP+FAFIEK   +R+PD++F++K+ ++ IPGFK  Y +N+FR+V+R+ FV+ TTVISML+PFFNDVVG+LGALGFWPLTVYFPVEMYI Q+K+ KWST+W+CLQ+LSVACL                DLK YKPF ++Y
Sbjct:  335 LDIANAAIVVHLVGAYQVFAQPIFAFIEKSVAERYPDNDFLSKEFEIRIPGFKSPYKVNVFRMVYRSGFVVTTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIKQRKVEKWSTRWVCLQMLSVACLVISVVAGVGSIAGVMLDLKVYKPFKSTY 493          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.491e-56
Identity = 104/159 (65.41%), Postives = 125/159 (78.62%), Query Frame = 2
Query:    5 LDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKC-YNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 478
            LD+ANAAIVIHLVGAYQVF QP+FAFIEKQA  RFPDS+ +TK+ ++ IPGF+  Y +N+FR V+R+ FV+LTTVISML+PFFNDVVG+LGALGFWPLTVYFPVEMYI Q+K+ +WS KW+CLQ+LS  CL                DLK YKPF T+Y
Sbjct:  308 LDVANAAIVIHLVGAYQVFAQPIFAFIEKQAAARFPDSDLVTKEYEIRIPGFRSPYKVNVFRAVYRSGFVVLTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIRQRKVERWSMKWVCLQMLSCGCLMITLVAGVGSIAGVMLDLKVYKPFKTTY 466          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.065e-44
Identity = 77/158 (48.73%), Postives = 111/158 (70.25%), Query Frame = 2
Query:    5 LDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 478
            +D ANA I +HL+GAYQVF QP+F F+EK+ ++ +PD++FIT +  V +P    +N++LFRLVWRT +V++TTV++M+ PFFN ++GL+GA  FWPLTVYFPVEM+IAQ KI K+S +W+ L+ +   CL                 +K+YKPF T +
Sbjct:  327 IDFANACIAVHLIGAYQVFAQPIFQFVEKKCNRNYPDNKFITSEYSVNVPFLGKFNISLFRLVWRTAYVVITTVVAMIFPFFNAILGLIGAASFWPLTVYFPVEMHIAQTKIKKYSARWIALKTMCYVCLIVSLLAAAGSIAGLISSVKTYKPFRTMH 484          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.987e-43
Identity = 78/154 (50.65%), Postives = 107/154 (69.48%), Query Frame = 2
Query:    5 LDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPF 466
            +D AN  I +HL+GAYQVFCQP+F F+E Q+ +R+PD++FIT + K+ +P    +++N  RLVWRT +V++T V++M+ PFFND +GL+GA  FWPLTVYFP+EM+IAQKKIPK+S  W  L+ILS  C                  LK +KPF
Sbjct:  325 IDFANVCIAVHLIGAYQVFCQPIFQFVESQSAKRWPDNKFITGEYKIHVPCCGDFSINFLRLVWRTSYVVVTAVVAMIFPFFNDFLGLIGAASFWPLTVYFPIEMHIAQKKIPKFSFTWTWLKILSWTCFIVSLVAAAGSVQGLIQSLKDFKPF 478          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.067e-41
Identity = 80/156 (51.28%), Postives = 107/156 (68.59%), Query Frame = 2
Query:    5 LDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDI--KVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPF 466
            +D ANA I +HL+GAYQV+ QP F F+E+  ++++P S FI K+   KVP+ G KC  +NLFRLVWRT +V+LTT ++M+ PFFN ++GLLGA  FWPLTVYFPV M+IAQ K+ K+S +WL L +L + CL                 +KSYKPF
Sbjct:  318 IDFANACIALHLIGAYQVYAQPFFQFVEENCNKKWPQSNFINKEYSSKVPLLG-KC-RVNLFRLVWRTCYVVLTTFVAMIFPFFNAILGLLGAFAFWPLTVYFPVAMHIAQAKVKKYSRRWLALNLLVLVCLIVSALAAVGSIIGLINSVKSYKPF 471          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: AAP7_ARATH (Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.976e-31
Identity = 62/132 (46.97%), Postives = 93/132 (70.45%), Query Frame = 2
Query:    5 LDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITK--DIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACL 394
            +D ANA IV+HLVG YQV+ QP+FA  E+   +++P+++FI +    K+P+   +   LN  R+  RT++V++TT ++++ P+FN+V+G++GAL FWPL VYFPVEM I QKKI  W+  WL L+  S  CL
Sbjct:  316 VDFANACIVLHLVGGYQVYSQPIFAAAERSLTKKYPENKFIARFYGFKLPLLRGETVRLNPMRMCLRTMYVLITTGVAVMFPYFNEVLGVVGALAFWPLAVYFPVEMCILQKKIRSWTRPWLLLRGFSFVCL 447          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: LHTL2_ARATH (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana GN=At1g67640 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 39/126 (30.95%), Postives = 63/126 (50.00%), Query Frame = 2
Query:   11 IANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPK----WSTKWLCLQI 376
            IANA +V+H++G+YQ++  P+F  +E           F+ K +    P FK       R + RT++V  T  +++ +PFF  ++G  G   F P T Y P  M++  KK  K    W   W C+ +
Sbjct:  306 IANAFVVVHVIGSYQIYAMPVFDMLET----------FLVKKMMFA-PSFK------LRFITRTLYVAFTMFVAICIPFFGGLLGFFGGFAFAPTTYYLPCIMWLCIKKPKKYGLSWCINWFCIVV 414          
BLAST of CK933940 vs. ExPASy Swiss-Prot
Match: LHTL6_ARATH (Lysine histidine transporter-like 6 OS=Arabidopsis thaliana GN=At1g25530 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 38/116 (32.76%), Postives = 59/116 (50.86%), Query Frame = 2
Query:   14 ANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKW 361
            AN  +V+H++G+YQVF  P+F  +E+    +F               GFK  +  + R   RTI+V  T  I +  PFF D++G  G  GF P + + P  M++  KK  ++S  W
Sbjct:  306 ANLMVVVHVIGSYQVFAMPVFDLLERMMVNKF---------------GFK--HGVVLRFFTRTIYVAFTLFIGVSFPFFGDLLGFFGGFGFAPTSFFLPSIMWLIIKKPRRFSVTW 404          
The following BLAST results are available for this feature:
BLAST of CK933940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
AAP3_ARATH4.860e-6674.68Amino acid permease 3 OS=Arabidopsis thaliana GN=A... [more]
AAP5_ARATH6.797e-6067.72Amino acid permease 5 OS=Arabidopsis thaliana GN=A... [more]
AAP2_ARATH2.047e-5664.15Amino acid permease 2 OS=Arabidopsis thaliana GN=A... [more]
AAP4_ARATH3.491e-5665.41Amino acid permease 4 OS=Arabidopsis thaliana GN=A... [more]
AAP1_ARATH3.065e-4448.73Amino acid permease 1 OS=Arabidopsis thaliana GN=A... [more]
AAP6_ARATH1.987e-4350.65Amino acid permease 6 OS=Arabidopsis thaliana GN=A... [more]
AAP8_ARATH7.067e-4151.28Amino acid permease 8 OS=Arabidopsis thaliana GN=A... [more]
AAP7_ARATH2.976e-3146.97Probable amino acid permease 7 OS=Arabidopsis thal... [more]
LHTL2_ARATH8.142e-1330.95Lysine histidine transporter-like 2 OS=Arabidopsis... [more]
LHTL6_ARATH1.176e-1132.76Lysine histidine transporter-like 6 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933940 ID=CK933940; Name=CK933940; organism=Citrus sinensis; type=EST; length=769bp
GGGACTTGACATAGCCAATGCAGCCATTGTCATCCACCTTGTTGGTGCAT
ACCAAGTTTTCTGCCAACCCCTCTTTGCATTCATTGAAAAACAAGCTCAT
CAACGATTCCCGGATAGCGAATTCATCACAAAGGATATTAAAGTCCCAAT
CCCTGGATTTAAGTGCTACAACCTCAACCTCTTCCGGTTGGTTTGGAGGA
CAATTTTTGTCATCTTAACAACTGTGATTTCAATGCTTCTCCCATTCTTT
AACGACGTTGTTGGTCTCCTCGGAGCTCTAGGATTTTGGCCACTTACAGT
ATACTTCCCTGTTGAGATGTATATTGCGCAAAAGAAGATACCAAAGTGGA
GCACAAAATGGCTTTGTCTCCAAATCCTAAGCGTAGCTTGCCTAATAATC
ACCATAGCTGCAGCGGCTGGCTCTATTGCAGGAGTTGTTACTGACCTTAA
GTCTTATAAGCCCTTCAGCACCAGCTACTAATTCAGTCTGATTACAAATG
GAAGTAGCCATTGATGATGTTCGACAAGGAAAAGGATCAATCATTAGACT
TTTCAGTTCTTGTTTATGTTAATATGTCAAGTGCCTAAACTGGTCATGTT
ACTGCTATTTTCATTAGCTCTCCGTTGTCTCTTTGCCCTTCTCATCACAA
ACAAAAGCAGGACCATGTATCTGTGCATAGGAGTCCTCAAGATTTGAACA
ATGTAACGTTGTCCATTTTCCAAATGCAAAATAGAAAAATTTAAACAAAA
AAAAAAAAAAAAAAAAAAA
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