CK933942

Overview
NameCK933942
Unique NameCK933942
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13188 contig Csv1_Contig13188:1..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA2_ARATH (Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana GN=ASNAP2 PE=1 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 8.538e-88
Identity = 155/217 (71.43%), Postives = 179/217 (82.49%), Query Frame = 1
Query:  169 MGDQIARXXXXXXXXXXXLNGWGLFGSKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            MGD + R           LNGWG+FGSK EDAADL +KAANS+KLAKSWD+AG  Y+KLA+CHLK +SKH+AA AY +AA CYKK  +NEA SCLE+AVN+FC+IGRL+MAARYYKEIAE YES+   EQ I +FEKAA+ FQNEEVTTSANQC  KVAQYAA+LEQY K+I+IYE+IAR SLNNNLLKYGVKGHLL AG+C LCK DVV+ITNALE
Sbjct:    1 MGDHLVRAEEFEKKAEKKLNGWGIFGSKYEDAADLLEKAANSYKLAKSWDQAGKAYLKLADCHLKSDSKHDAANAYAEAAKCYKKVDTNEAASCLERAVNIFCEIGRLNMAARYYKEIAEYYESDQKFEQAIAYFEKAAEFFQNEEVTTSANQCNLKVAQYAAQLEQYEKAIKIYEDIARHSLNNNLLKYGVKGHLLTAGMCHLCKADVVSITNALE 217          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA_VITVI (Alpha-soluble NSF attachment protein OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 8.835e-85
Identity = 152/217 (70.05%), Postives = 175/217 (80.65%), Query Frame = 1
Query:  169 MGDQIARXXXXXXXXXXXLNGWGLFGSKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            M D I R           ++GWGLFGSK EDAAD +DKAAN FKLAKSWD+AG+TYVKL+      +SKHEAAQAY DA HCYKKTS+ EAISCLEQA  +F D GR +MA +YYKEIAELYE E N EQ I++FEKAAD++Q+EE TT+ANQC  KVAQ+AA+LEQY K+I+IYE+I R SLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNAL+
Sbjct:    1 MADNIQRGEEFEKKAEKKISGWGLFGSKYEDAADFYDKAANCFKLAKSWDRAGSTYVKLSTVIQSSDSKHEAAQAYADAGHCYKKTSAKEAISCLEQAAYLFLDNGRFNMAGKYYKEIAELYELEQNFEQAIIYFEKAADIYQSEEATTAANQCNAKVAQFAAQLEQYQKAIQIYEDIGRPSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALD 217          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA_SOLTU (Alpha-soluble NSF attachment protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 8.557e-80
Identity = 148/217 (68.20%), Postives = 171/217 (78.80%), Query Frame = 1
Query:  169 MGDQIARXXXXXXXXXXXLNGWGLFGSKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            MGD IAR           L GW LFGSK EDAADLFDKA N FKLAKSWDKAGA YVKLANCHLKL+SKHEAA AY DAAHCYKK++  EA+SCLEQAVN F DIGRL+M+ARYYKEIAELYE E N++Q I +     +   +E+V+   NQC +K+AQ++A+ E+Y K+IEI+EEIAR S+NNNLLKYGV+ HLLNAGICQLCKGDVV I NALE
Sbjct:    1 MGDHIARGEDFENKAEKKLGGWALFGSKYEDAADLFDKAGNCFKLAKSWDKAGAVYVKLANCHLKLDSKHEAANAYADAAHCYKKSNIKEAVSCLEQAVNFFLDIGRLNMSARYYKEIAELYEQEQNLDQAIRYAVYEINP-GSEDVSAPPNQCLKKIAQFSAQNEKYPKAIEIFEEIARHSVNNNLLKYGVREHLLNAGICQLCKGDVVPINNALE 216          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA_DICDI (Alpha-soluble NSF attachment protein OS=Dictyostelium discoideum GN=snpA PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.599e-47
Identity = 95/201 (47.26%), Postives = 138/201 (68.66%), Query Frame = 1
Query:  226 NGWGLFG---SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            N + +FG   S+ +DAA  + KAAN FK++K WD+AGA + K A C LK  SKH+AA +YV AA CYKK +  +AI+CL+ A+  + D GR +++A++ KEIAELYE+E + +Q I  ++ A+D F  E  T S++QC  K+A ++A+LE+Y KSIEIYE++A  SL+NNL ++G K + L A +C L   DVV    AL+
Sbjct:   22 NFFKMFGGGSSRYDDAASDYTKAANLFKMSKKWDQAGAAFQKAAECFLKGSSKHDAASSYVLAAGCYKKGNVIDAITCLKAAIEYYTDEGRFAISAKHQKEIAELYEAEGDFDQAIASYQIASDYFDGENSTVSSHQCLLKIALFSAQLERYEKSIEIYEQVAAASLDNNLTQWGCKEYFLRACLCYLAADDVVGAERALQ 222          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA_BOVIN (Alpha-soluble NSF attachment protein OS=Bos taurus GN=NAPA PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.844e-45
Identity = 84/186 (45.16%), Postives = 134/186 (72.04%), Query Frame = 1
Query:  235 GLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 783
            GLFG  SK E+A +++ +AAN FK+AK+W  AG+ + + A+ HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C
Sbjct:   30 GLFGGSSKIEEACEIYARAANMFKMAKNWSAAGSAFCQAAHVHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTNAMDSPLLKYSAKDYFFKAALCHFC 215          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAP_DROME (Soluble NSF attachment protein OS=Drosophila melanogaster GN=Snap PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.525e-44
Identity = 86/197 (43.65%), Postives = 137/197 (69.54%), Query Frame = 1
Query:  238 LFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            LFG  +K EDA + + +A N FK++K+W KAG  + + A  H +  S+H+A   YVDA++CYKK     A++CL ++++++ D+GR +MAA++++ IAE+YES+ +N+ ++I  +E+AAD F+ EE  +SAN+C  KVAQYAA+LE Y K+I IYE++A  SL ++LLKY  K +   A +C L   D++   +A+E
Sbjct:   29 LFGGSNKVEDAIECYQRAGNMFKMSKNWTKAGECFCEAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYTDMGRFTMAAKHHQSIAEMYESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYAAQLEDYEKAISIYEQVAASSLESSLLKYSAKEYFFRAALCHL-SVDLLNAQHAIE 224          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA_RAT (Alpha-soluble NSF attachment protein OS=Rattus norvegicus GN=Napa PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.601e-44
Identity = 83/186 (44.62%), Postives = 132/186 (70.97%), Query Frame = 1
Query:  235 GLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 783
            GLFG  SK E+A +++ +AAN FK+AK+W  AG  + + A  HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  ++E+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C
Sbjct:   30 GLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFC 215          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA_MOUSE (Alpha-soluble NSF attachment protein OS=Mus musculus GN=Napa PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.601e-44
Identity = 83/186 (44.62%), Postives = 132/186 (70.97%), Query Frame = 1
Query:  235 GLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 783
            GLFG  SK E+A +++ +AAN FK+AK+W  AG  + + A  HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  ++E+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C
Sbjct:   30 GLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFC 215          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAB_MOUSE (Beta-soluble NSF attachment protein OS=Mus musculus GN=Napb PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.567e-44
Identity = 82/183 (44.81%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  235 GLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGIC 774
            GLFG  ++ E+A +++ +AAN FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEIYE++   +++N LLKY  K +   A +C
Sbjct:   30 GLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALC 212          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAB_HUMAN (Beta-soluble NSF attachment protein OS=Homo sapiens GN=NAPB PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.567e-44
Identity = 82/183 (44.81%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  235 GLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGIC 774
            GLFG  ++ E+A +++ +AAN FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEIYE++   +++N LLKY  K +   A +C
Sbjct:   30 GLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALC 212          
The following BLAST results are available for this feature:
BLAST of CK933942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SNAA2_ARATH8.538e-8871.43Alpha-soluble NSF attachment protein 2 OS=Arabidop... [more]
SNAA_VITVI8.835e-8570.05Alpha-soluble NSF attachment protein OS=Vitis vini... [more]
SNAA_SOLTU8.557e-8068.20Alpha-soluble NSF attachment protein OS=Solanum tu... [more]
SNAA_DICDI5.599e-4747.26Alpha-soluble NSF attachment protein OS=Dictyostel... [more]
SNAA_BOVIN6.844e-4545.16Alpha-soluble NSF attachment protein OS=Bos taurus... [more]
SNAP_DROME1.525e-4443.65Soluble NSF attachment protein OS=Drosophila melan... [more]
SNAA_RAT2.601e-4444.62Alpha-soluble NSF attachment protein OS=Rattus nor... [more]
SNAA_MOUSE2.601e-4444.62Alpha-soluble NSF attachment protein OS=Mus muscul... [more]
SNAB_MOUSE7.567e-4444.81Beta-soluble NSF attachment protein OS=Mus musculu... [more]
SNAB_HUMAN7.567e-4444.81Beta-soluble NSF attachment protein OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933942 ID=CK933942; Name=CK933942; organism=Citrus sinensis; type=EST; length=821bp
GGGGGCACTCTTGAGAATTCTTTTCCTCTTTACTTTTCCTTTCTTAGCAA
ATACCTAACCTCTGACACTACCAATTCCCCTTTTTTTCCCGATTGTTTTA
TTTTCTTCTAGTTCTTGCTCCGATTAATTCATTTCTCCGCCTATAATAAA
ATAAAATACTAAAAGAAAATGGGCGATCAGATTGCTCGAGCCGAGGAATT
CGAGAAAAAAGCGGAGAAAAAGCTTAATGGTTGGGGTTTATTCGGCTCCA
AGTGCGAAGACGCCGCCGATCTCTTCGATAAAGCCGCCAATTCCTTCAAG
CTCGCCAAATCATGGGATAAAGCTGGAGCAACTTATGTTAAGTTGGCAAA
CTGTCATTTAAAGTTGGAAAGCAAACATGAAGCTGCTCAAGCTTATGTTG
ATGCTGCCCACTGCTATAAGAAAACATCTTCAAATGAGGCCATATCTTGC
TTAGAACAGGCTGTAAATATGTTTTGTGACATTGGAAGGCTCAGTATGGC
TGCAAGATATTATAAGGAAATTGCTGAGCTGTATGAATCTGAGCACAACA
TTGAACAGACTATTGTTTTCTTTGAGAAGGCAGCTGATATGTTCCAAAAT
GAAGAAGTAACAACTTCTGCTAACCAGTGCAAGCAGAAAGTTGCACAATA
TGCTGCTGAATTGGAACAATATCACAAGTCAATTGAGATTTATGAAGAGA
TTGCTAGGCAGTCTCTCAACAACAACTTGTTGAAATATGGAGTGAAAGGA
CATCTTCTTAATGCTGGCATATGCCAACTTTGCAAGGGTGATGTTGTTGC
AATTACCAACGCATTGGAGCG
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