CK933977

Overview
NameCK933977
Unique NameCK933977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1647 contig Csv1_Contig1647:1..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 451.055 bits (1159), Expect = 3.911e-126
Identity = 205/223 (91.93%), Postives = 214/223 (95.96%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            VFFEERF+DGWE+RWV SDWKKDENTAGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS   DQKKFGGDTPYSIMFGPDICGYSTKKVHAIL YN TN LIKKEVPCETDQLTHVYT ++RPDATYSILIDNVEKQ+GSLY+DWDLLPPK IKDP+AKKPEDWD+KEYIPDPEDKKPEGYDDIPKEI
Sbjct:   22 VFFEERFEDGWENRWVKSDWKKDENTAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSSSTDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNDTNHLIKKEVPCETDQLTHVYTLVIRPDATYSILIDNVEKQTGSLYTDWDLLPPKKIKDPEAKKPEDWDEKEYIPDPEDKKPEGYDDIPKEI 244          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 448.743 bits (1153), Expect = 1.941e-125
Identity = 203/223 (91.03%), Postives = 216/223 (96.86%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            VFFEERF+DGW+ RWVTS+WKKDEN AGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGY+KLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAIL YN TN LIKK+VPCETDQLTHVYTFI+RPDATYSILIDN+EKQ+GSLYSDWDLLP K IKDP+AKKPEDW+D+EYIPDPEDKKPEGYDDIPKEI
Sbjct:   26 VFFEERFEDGWDKRWVTSEWKKDENLAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYIKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNNTNNLIKKDVPCETDQLTHVYTFIIRPDATYSILIDNLEKQTGSLYSDWDLLPAKKIKDPEAKKPEDWEDQEYIPDPEDKKPEGYDDIPKEI 248          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1)

HSP 1 Score: 443.736 bits (1140), Expect = 6.243e-124
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            VFFEE F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNK K LVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN TN LIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDP AKKPEDWD+KE+I DPEDKKPEGYDDIP+EI
Sbjct:   29 VFFEESFNDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKGKNLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPSAKKPEDWDEKEFIDDPEDKKPEGYDDIPEEI 251          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 2.372e-123
Identity = 208/247 (84.21%), Postives = 216/247 (87.45%), Query Frame = 3
Query:   66 MAKLNPSFXXXXXXXXXXXXXXXHVFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            MAKLNP F                V FEE+F+DGWE RWV SDWKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS +VDQ KFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTN LIKKEVPCETDQLTHVYTF+LRPDATYSILIDNVEKQ+GSLYSDWDLLP K IKDP AKKPEDWDDKEYIPDPED KP GYDDIPKEI
Sbjct:    1 MAKLNPKFISLILFALVVIVSA-EVIFEEKFEDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKDPSAKKPEDWDDKEYIPDPEDTKPAGYDDIPKEI 246          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 3.099e-123
Identity = 205/243 (84.36%), Postives = 214/243 (88.07%), Query Frame = 3
Query:   78 NPSFXXXXXXXXXXXXXXXHVFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            NPSF                VFFEERF+DGWE RWV S+WKKDE+ AGEWNYT+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNKD TLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAI  YN TN LIKK+VPCETDQLTHVYTFILRPDATYSILIDN EKQ+GSLY+DWDLLP K IKDP+AKKPEDWDDKE+IPDPEDKKPEGYDDIP EI
Sbjct:    7 NPSFLSLLLLLSLFAIASAKVFFEERFEDGWEKRWVKSEWKKDESMAGEWNYTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKDNTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAIFNYNDTNHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWDLLPAKKIKDPEAKKPEDWDDKEFIPDPEDKKPEGYDDIPAEI 249          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3)

HSP 1 Score: 438.728 bits (1127), Expect = 2.008e-122
Identity = 201/223 (90.13%), Postives = 212/223 (95.07%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            V FEERFDDGWE+RWV S+WKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN  N LIKK+VPCETDQLTHVYTFILRPDATYSILIDNVEKQ+GSLYSDWDLLPPK IKDP AKKPEDWD++EYI DPEDKKP+GYDDIPKEI
Sbjct:   24 VIFEERFDDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWDEQEYISDPEDKKPDGYDDIPKEI 246          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1)

HSP 1 Score: 438.343 bits (1126), Expect = 2.623e-122
Identity = 200/223 (89.69%), Postives = 213/223 (95.52%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            VFFEERF+DGWES+WV SDWK+DEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISA FPEFSNK KTLVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILT   TN LIKK+VPCETDQLTHVYTFILRPDA+YSILIDNVEKQSGS+Y+DWD+LPPK IKDP+AKKPEDW+DKEYIPDPEDKKPEGYDDIPKEI
Sbjct:   24 VFFEERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPEFSNKGKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKGETNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPPKQIKDPEAKKPEDWEDKEYIPDPEDKKPEGYDDIPKEI 246          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2)

HSP 1 Score: 425.631 bits (1093), Expect = 1.759e-118
Identity = 191/223 (85.65%), Postives = 207/223 (92.83%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            VFF+E+F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGDP DKGIQTSEDYRFYAISAE+PEFSNKDKTLV QFSVKHEQKLDCGGGY+KLL G+VDQKKFGGDTPYSIMFGPDICGYSTKKVH I T N  N LIKK+VPCETDQL+HVYT I+ PDATY+ILIDNVEKQSGS+Y  WD+LPPK IKDP+AKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI
Sbjct:   31 VFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 253          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1)

HSP 1 Score: 402.905 bits (1034), Expect = 1.221e-111
Identity = 183/223 (82.06%), Postives = 201/223 (90.13%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            VFF+E+F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGD  DKGIQTSEDYRFYAISAE+PEFSNKDKTLV QFSVKHEQKLDCGGGY+KLL G+VDQK  GGDT YSI+  PDI  YSTKKVH ILT +G N LIKK+VPC+TDQLTHVYTFI+RPDATYSILIDN EK +GS+Y  WD+LPPK IKDP+AKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI
Sbjct:   27 VFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDAEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKTLGGDTSYSIISRPDISRYSTKKVHTILTKDGKNHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPPKKIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 249          
BLAST of CK933977 vs. ExPASy Swiss-Prot
Match: CALR3_ARATH (Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 2.027e-90
Identity = 146/223 (65.47%), Postives = 185/223 (82.96%), Query Frame = 3
Query:  138 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 806
            +F EE F+ GW+SRWV SDWK++E  AG + +TAGKW GDP++KGIQT  D + YAISA+ PEFSNK++TLV Q+SVK EQ ++CGG Y+KLLSG V+QK+FGGDTPYS+MFGPDICG  TKK+H I++Y G N  IKK++ CETD+L H YTFILRPDA+YS+L+DN E++ GS+Y+DWD+LPP+ IK  +AKKPEDWDD+EYI DP D KPEG+D IP+EI
Sbjct:   30 IFLEEHFEGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPDNKGIQTYNDAKHYAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDICGTQTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPEGFDSIPREI 252          
The following BLAST results are available for this feature:
BLAST of CK933977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CALR_RICCO3.911e-12691.93Calreticulin OS=Ricinus communis PE=2 SV=1[more]
CALR_PRUAR1.941e-12591.03Calreticulin OS=Prunus armeniaca PE=2 SV=1[more]
CALR_NICPL6.243e-12491.93Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 ... [more]
CALR1_ARATH2.372e-12384.21Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=... [more]
CALR_BETVU3.099e-12384.36Calreticulin OS=Beta vulgaris PE=2 SV=1[more]
CALR2_ARATH2.008e-12290.13Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=... [more]
CALR_BERST2.623e-12289.69Calreticulin OS=Berberis stolonifera PE=2 SV=1[more]
CALR_ORYSJ1.759e-11885.65Calreticulin OS=Oryza sativa subsp. japonica GN=Os... [more]
CALR_MAIZE1.221e-11182.06Calreticulin OS=Zea mays GN=CRT PE=2 SV=1[more]
CALR3_ARATH2.027e-9065.47Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_H11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933977 ID=CK933977; Name=CK933977; organism=Citrus sinensis; type=EST; length=877bp
GGGGATATATTCAGTCCTCTTTCACACTTCACTCTACAGAGCACTTCCTC
TCTCTCGCTCTAAAAATGGCGAAATTAAACCCTAGCTTTCTCTCTCTAAC
TCTCCTCACTATCGTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGAAG
AACGCTTTGACGATGGATGGGAAAGCCGGTGGGTTACATCTGATTGGAAG
AAAGATGAGAACACGGCTGGAGAATGGAACTACACTGCTGGGAAATGGAA
TGGGGACCCGAATGATAAAGGTATTCAAACTAGTGAAGACTACAGGTTCT
ATGCTATTTCAGCTGAATTCCCTGAATTCAGCAACAAGGACAAGACACTC
GTGTTCCAGTTTTCTGTTAAGCACGAACAGAAGCTTGACTGTGGTGGTGG
CTACATGAAGTTGCTTAGTGGCGAAGTTGATCAGAAGAAATTTGGTGGTG
ATACCCCTTACAGTATCATGTTTGGACCAGATATCTGTGGTTATAGCACT
AAGAAAGTGCATGCCATTCTTACCTACAATGGAACAAACAAATTGATCAA
GAAGGAAGTACCATGTGAGACTGACCAACTCACTCATGTTTATACTTTCA
TCCTCCGTCCAGATGCTACTTACAGCATCCTCATTGACAATGTGGAGAAA
CAATCTGGTAGCTTGTACTCTGATTGGGATCTCCTCCCTCCAAAGACCAT
CAAGGATCCTGACGCCAAGAAACCTGAAGACTGGGACGACAAAGAATATA
TTCCCGATCCTGAAGACAAGAAGCCAGAGGGCTATGATGACATTCCAAAG
GAGATAACAGATCCTGATGCCAAGAAGCCTGATGATTGGGATGATGAGGA
AGATGGTGAATGGACAGCTCCAACCAT
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