CK933988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXB2_DICDI (Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.188e-39 Identity = 85/227 (37.44%), Postives = 129/227 (56.83%), Query Frame = 1 Query: 208 IWPLPAQFTSGNDTLSVDPALYLXXXXXXXXXXXXXEAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLV--AKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLWKGAYSKWERYTVED 882 IWP+P + +G+ T+ + P + +A +RY +IF + + + S+ N +KI+V S++E LQ+G DESY + + + ++G II E TVYGA+RGLET Q+ FDY + + PW IQD PR+ RG+++DTSRH+ VDV+K+ IE+++Y K NV HWH +D QSFPL T+P + KG++S E Y+ D Sbjct: 59 IWPMPKKVLNGDITVYISP--HFQFTTNLTKSTTLKKAMDRYYKLIFTEDSKSHSGISILNE-------------IKILVKSEDETLQIGFDESYEIYIDDSGDDGGKIIAE------TVYGAIRGLETLYQMIGFDYQREYYQIKHCPWIIQDSPRYPHRGVMLDTSRHFYSVDVLKEFIEALAYNKFNVFHWHAVDSQSFPLTSTTFPKITKGSWSSQEIYSTRD 264
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXB1_DICDI (Beta-hexosaminidase subunit B1 OS=Dictyostelium discoideum GN=hexb1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.468e-35 Identity = 90/226 (39.82%), Postives = 120/226 (53.10%), Query Frame = 1 Query: 208 IWPLPAQFTSGNDTLSVDPALYLXXXXXXXXXXXXXEAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKA-PWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLWKGAYSKWERYTVED 882 IWP P GN+++ + + +Y +IF + +NS S N K L I + S NE L+ G DESY L++ NE + +E NTVYG +RGLETF QL +++ S + P I DKPRF RG+++DTSRH+ VD I ++IES+SY K N LHWHIID QSFPL +YPNL GA+SK E Y+ D Sbjct: 48 IWPAPFYGQFGNNSILISKEFNFTIISDSTLLLN--KTLSKYYNLIFTQD-NLINSSS--NTLNK----------LNINLKSKNEILKFGFDESYKLIIKNNEN------SKLEGNTVYGIMRGLETFYQLIKYNFSDNSYFIENCLPLIINDKPRFPHRGVMLDTSRHFYSVDTILKVIESLSYNKFNTLHWHIIDSQSFPLSSKSYPNLINGAWSKSEIYSYHD 252
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXA1_DICDI (Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.972e-29 Identity = 60/150 (40.00%), Postives = 98/150 (65.33%), Query Frame = 1 Query: 433 LKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLWKGAYSKWERYTVED 882 L + ++SD+E LQLG+DESY+L + + G ++A +YGA+RGLETF QL ++ S + I D PR+ +RG ++D++RHY+P ++I +I+S+ ++K N LHWH++D +FP+E TYP+L KGA+S ++ +D Sbjct: 84 LSVTIYSDDETLQLGIDESYSLSIEQ-------GSYQLKATNIYGAMRGLETFKQLIVYNELENSYSIVCVS--ISDSPRYPWRGFMVDSARHYIPKNMILHMIDSLGFSKFNTLHWHMVDAVAFPVESTTYPDLTKGAFSPSATFSHDD 224
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXA2_DICDI (Beta-hexosaminidase subunit A2 OS=Dictyostelium discoideum GN=hexa2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.471e-27 Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 1 Query: 319 AFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNL 837 + RY+++ F V NN K S + L +++ SD+E L+LG+DESY LLV ++ I+ANT+YGA+RGLETF Q+ +D S + A + D P + +RGLL+D +RH+LP +++ II+SM Y K N +HWH+ID +FP+E TYP L Sbjct: 66 SISRYQSLFFPF---------VSNNVLKDSSSNIE---LSLIIASDDETLELGIDESYFLLVNQDT-------YQIKANTIYGAMRGLETFKQMVVYDVVENSYSLTCAE--VVDYPTYQWRGLLVDNARHFLPKNMVLHIIDSMGYNKFNTMHWHLIDTVAFPVESKTYPKL 217
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXB_HUMAN (Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26 Identity = 70/136 (51.47%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 481 DESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFD-YDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLW-KGAYSKWERYTVED 882 DESYTLLV + A ++AN V+GALRGLETFSQL D Y T ++ I D PRF+ RG+LIDTSRHYLPV +I + +++M++ K NVLHWHI+D+QSFP + T+P L KG+YS YT D Sbjct: 146 DESYTLLVKEPV-------AVLKANRVWGALRGLETFSQLVYQDSYGTFTINEST----IIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPND 270
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXB_RAT (Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26 Identity = 70/138 (50.72%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 481 DESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFD-YDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLW-KGAYSKWERYTVEDAH 888 DESY+LLV + L ++AN V+GALRGLETFSQL D Y T ++ I D PRF RG+LIDTSRHYLPV I + +++M++ K NVLHWHI+D+QSFP + T+P L KG+YS YT D H Sbjct: 124 DESYSLLVQEPVAL-------LKANEVWGALRGLETFSQLVYQDAYGTFTINEST----IADSPRFPHRGILIDTSRHYLPVKTIFKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDIH 250
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXB_FELCA (Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.623e-26 Identity = 85/200 (42.50%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 316 EAFERYKAIIFEHEVEGVNSHSVFNNFRKRR----SWGFDIGTLKIVVHSDNE-DL--QLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFD-YDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLW-KGAYSKWERYTVEDAH 888 EAF RY IF + R+RR + ++ L + V D+E DL + DESYTLLV + A ++AN V+G LRGLETFSQL D Y T +V I D PRF RG+LIDT+RH+LPV I + +++M++ K NVLHWHI+D+QSFP + T+P L KG+YS YT D H Sbjct: 70 EAFRRYHEYIFGFDK------------RQRRPAKPNSAIELQQLLVTVVLDSECDLFPNITSDESYTLLVKEPV-------AFLKANRVWGVLRGLETFSQLIYQDSYGTFTVNESD----IIDSPRFPHRGILIDTARHFLPVKSILKTLDAMAFNKFNVLHWHIVDDQSFPYQSVTFPELSNKGSYSLSHVYTPNDVH 246
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXB_MOUSE (Beta-hexosaminidase subunit beta OS=Mus musculus GN=Hexb PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.798e-25 Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 433 LKIVVHSDNEDL-QLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLW-KGAYSKWERYTVED 882 + I + S+ E L DE+Y+LLV + A ++AN+V+GALRGLETFSQL D + + I D PRF RG+LIDTSRH+LPV I + +++M++ K NVLHWHI+D+QSFP + T+P L KG+YS YT D Sbjct: 108 VSITLESECESFPSLSSDETYSLLVQEPV-------AVLKANSVWGALRGLETFSQLVYQDSFGTFTINESS---IADSPRFPHRGILIDTSRHFLPVKTILKTLDAMAFNKFNVLHWHIVDDQSFPYQSTTFPELSNKGSYSLSHVYTPND 249
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXA_RAT (Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24 Identity = 72/191 (37.70%), Postives = 107/191 (56.02%), Query Frame = 1 Query: 316 EAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLW-KGAYSKWER-YTVED 882 EAF RY++++F G S + +K++ G +I + +V NE L E+YTL + ++ L + + TV+GALRGLETFSQL + + + I D PRF RG+L+DTSRHYLP+ I ++ M+Y K NV HWH++D+ SFP E T+P L KG+++ YT +D Sbjct: 63 EAFRRYRSLLF-----GSGSWPRPSFSKKQQPLGKNILMVSVVTAECNEFPNLESVENYTLTINDDQCL-------LSSETVWGALRGLETFSQLV---WKSAEGTFFINKTKITDFPRFPHRGILLDTSRHYLPLSSILNTLDVMAYNKFNVFHWHLVDDSSFPYESFTFPELTRKGSFNPVTHIYTAQD 238
BLAST of CK933988 vs. ExPASy Swiss-Prot
Match: HEXA_MOUSE (Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24 Identity = 73/191 (38.22%), Postives = 108/191 (56.54%), Query Frame = 1 Query: 316 EAFERYKAIIFEHEVEGVNSHSVFNNFRKRRSWGFDIGTLKIVVHSDNEDLQLGVDESYTLLVAKNEGLSIIGEATIEANTVYGALRGLETFSQLCSFDYDTKSVLVYKAPWYIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLW-KGAYSKWER-YTVED 882 EAF RY+ ++F G F+N K+++ G +I + +V NE L E+YTL + ++ L + + TV+GALRGLETFSQL + + + I+D PRF RG+L+DTSRHYLP+ I ++ M+Y K NV HWH++D+ SFP E T+P L KG+++ YT +D Sbjct: 63 EAFRRYRNLLFG---SGSWPRPSFSN--KQQTLGKNILVVSVVTAECNEFPNLESVENYTLTINDDQCL-------LASETVWGALRGLETFSQLV---WKSAEGTFFINKTKIKDFPRFPHRGVLLDTSRHYLPLSSILDTLDVMAYNKFNVFHWHLVDDSSFPYESFTFPELTRKGSFNPVTHIYTAQD 238 The following BLAST results are available for this feature:
BLAST of CK933988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933988 ID=CK933988; Name=CK933988; organism=Citrus sinensis; type=EST; length=889bpback to top |