CK934010

Overview
NameCK934010
Unique NameCK934010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934010 vs. ExPASy Swiss-Prot
Match: ASPL1_ARATH (Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.400e-37
Identity = 95/251 (37.85%), Postives = 133/251 (52.99%), Query Frame = 1
Query:   28 IYSCGQVQSGSFLDIAAPNGLFGLGMETISVPSILSKDGLTADSFSMCFGNDGIGRISFGDKGSPYQQETSFNV--NPSHPSYNITVTQIRVGTT-LIDVDITALFDSGTSFTYMVEPTYTRLLENFHSQVQDKRRQHDSRIPFEYCYDMSPDANASLIPSMSLRMKGGSHFTVYNPIIVI-STQGELVYCLAVVKSMELNI--IGQNFMTGYRVVFDRERLVLGWEKFNCYDIEDSYTFP-VKPHNTSVP 759
            +  CG+ QSG +LD  AP+GL GLG   ISVPS LSK GL  +SFS+CF  +  GRI FGD G   QQ T F    N  +  Y + V    +G + L     T   DSG SFTY+ E  Y ++       +    +  +  + +EYCY+ S +     +P++ L+    + F ++ P+ V   +QG + +CL +  S +  I  IGQN+M GYR+VFDRE + LGW    C   ED    P   P +TS P
Sbjct:  227 VIGCGKKQSGDYLDGVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQLDNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALEIDRHINATSKNFEG-VSWEYCYESSAEPK---VPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPISPSGQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQ--EDKIEPPQASPGSTSSP 471          
BLAST of CK934010 vs. ExPASy Swiss-Prot
Match: ASPL2_ARATH (Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11
Identity = 66/243 (27.16%), Postives = 105/243 (43.21%), Query Frame = 1
Query:   19 QYEIYSCGQVQSGSFLD-IAAPNGLFGLGMETISVPSILSKDGLTADSFSMCFGN-DGIGRISFGDKGSPYQQETSFNVNPSHPSYNITVTQIRVGTTLIDVDIT------ALFDSGTSFTYMVEPTYTRLLENFHSQVQDKRRQHDSRIPFEYCYDMSPDANASLIPSMSLRMKGGSHFTVYNPIIVISTQGELVYC-------LAVVKSMELNIIGQNFMTGYRVVFDRERLVLGWEKFNC 702
            Q  ++ CG  QSG   +  +A +G+ G G    SV S L+  G     FS C  N  G G  + G   SP  + T    N  H  YN+ +  + V  T +D+  +       + DSGT+  Y  +  Y  L+E   ++   K   H     F+ C+  S + + +  P +S   +     TVY P   + T  E +YC       L   +  E+ ++G   ++   VV+D +  V+GW   NC
Sbjct:  191 QEVVFGCGSDQSGQLGNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCLDNVKGGGIFAVGVVDSPKVKTTPMVPNQMH--YNVMLMGMDVDGTSLDLPRSIVRNGGTIVDSGTTLAYFPKVLYDSLIETILARQPVKL--HIVEETFQ-CFSFSTNVDEAF-PPVSFEFEDSVKLTVY-PHDYLFTLEEELYCFGWQAGGLTTDERSEVILLGDLVLSNKLVVYDLDNEVIGWADHNC 426          
The following BLAST results are available for this feature:
BLAST of CK934010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASPL1_ARATH1.400e-3737.85Aspartic proteinase-like protein 1 OS=Arabidopsis ... [more]
ASPL2_ARATH8.551e-1127.16Aspartic proteinase-like protein 2 OS=Arabidopsis ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCGF1004542_E08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934010 ID=CK934010; Name=CK934010; organism=Citrus sinensis; type=EST; length=826bp
GGGGTTGAGATGATAATGCAATATGAAATATACAGCTGTGGACAGGTTCA
AAGTGGTTCCTTTTTGGACATTGCAGCTCCAAATGGGTTGTTTGGGCTCG
GTATGGAGACAATATCAGTTCCTAGTATATTATCCAAGGACGGTCTAACA
GCAGATTCTTTCTCCATGTGTTTTGGAAATGATGGTATTGGAAGAATCAG
TTTTGGAGACAAGGGTAGTCCCTACCAGCAGGAGACCTCGTTTAATGTAA
ACCCATCACACCCATCCTACAACATTACTGTAACTCAAATTCGAGTGGGC
ACAACTTTGATTGATGTGGATATTACTGCTCTTTTTGATTCTGGGACCTC
TTTTACATATATGGTTGAGCCAACTTACACGAGGCTCTTAGAGAATTTCC
ATTCACAGGTACAAGATAAACGGCGCCAGCATGATTCAAGGATTCCTTTT
GAATATTGTTATGATATGAGCCCTGATGCAAATGCCAGCTTGATACCTAG
TATGAGCTTAAGGATGAAAGGTGGAAGCCATTTCACTGTCTACAATCCAA
TAATTGTCATATCCACTCAGGGTGAACTTGTGTATTGTCTGGCTGTCGTC
AAGAGCATGGAACTGAATATAATTGGGCAAAACTTTATGACTGGCTACCG
TGTGGTATTTGATCGAGAGAGACTAGTCTTGGGCTGGGAGAAGTTTAACT
GTTATGACATTGAGGATTCTTATACTTTTCCAGTAAAACCACACAATACA
TCTGTGCCTCCTGCTGTTGCTGCTGGATTAGGTAACAACTCCATTGCAGA
TGCAAAAAAAGAGACCAGAGATCATT
back to top