CK934056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 414.846 bits (1065), Expect = 3.428e-115 Identity = 199/262 (75.95%), Postives = 222/262 (84.73%), Query Frame = 3 Query: 153 MVISTTET-DSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 MV++TT DS E L+ TFASRYV+ +P+FKMP SMPKEAAYQ++NDELMLDGNPRLNLASFV+TWMEPECDKL+M+SINKNYVDMDEYPVTTELQNRCVNM+AHLF+ PV DD+ IMLAGLAFKRKWQ KRK +GKP+DKPNI TGANVQVCWEKFARYF GYYVM+P KAVE+VDENTICVAAILGSTLTGEFEDVKLL++LLTKKN+ETGW+TPIHVDAASGGFIAPFL+PDLEW Sbjct: 1 MVLTTTSIRDSEESLHCTFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAVGVGTVGSSEAIMLAGLAFKRKWQSKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLKEGYYVMDPAKAVEIVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWETPIHVDAASGGFIAPFLWPDLEW 262
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 6.466e-114 Identity = 199/261 (76.25%), Postives = 217/261 (83.14%), Query Frame = 3 Query: 153 MVISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 MV+S T + S ++STFASRYVR ++PRFKMPDNS+PKEAAYQ+INDELMLDGNPRLNLASFVTTWMEPECDKL+M SINKNYVDMDEYPVTTELQNRCVNMIAHLFN P+ D + IMLAGLAFKRKWQ K K QGKP DKPNI TGANVQVCWEKFARYF GYYVM+P KAVE+VDENTICVAAILGSTL GEFEDVK L+DLL +KN+ETGWDTPIHVDAASGGFIAPF+YP+LEW Sbjct: 1 MVLSKTVSQSDVSIHSTFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGETAVGVGTVGSSEAIMLAGLAFKRKWQNKMKAQGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEW 261
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 409.068 bits (1050), Expect = 1.881e-113 Identity = 196/261 (75.10%), Postives = 220/261 (84.29%), Query Frame = 3 Query: 153 MVISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 MV+S ++S ++STFASRYVR ++PRFKMP+NS+PKEAAYQ+INDELMLDGNPRLNLASFVTTWMEPECDKL+M+SINKNYVDMDEYPVTTELQNRCVNMIAHLFN P+ + + IMLAGLAFKRKWQ KRK +GKP DKPNI TGANVQVCWEKFARYF GYYVM+P +AV++VDENTICVAAILGSTL GEFEDVKLL+DLL +KN+ETGWDTPIHVDAASGGFIAPFLYP+LEW Sbjct: 1 MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 7.655e-107 Identity = 185/261 (70.88%), Postives = 211/261 (80.84%), Query Frame = 3 Query: 153 MVISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 MV++ T T+ + + F SRYVR +P++++ +NS+PK+AAYQ+I DELMLDGNPRLNLASFVTTWMEPECDKL+M SINKNYVDMDEYPVTTELQNRCVN+IA LFN P+ + + IMLAGLAFKRKWQ KRK +GKPYDKPNI TGANVQVCWEKFARYF GYYVM+P KA E+VDENTICVAAILGSTL GEFEDVK L+DLL KKNEETGW+TPIHVDAASGGFIAPF+YP+LEW Sbjct: 1 MVLTKTATNDESVC-TMFGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLSEGYYVMDPDKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFIYPELEW 260
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.418e-52 Identity = 106/255 (41.57%), Postives = 148/255 (58.04%), Query Frame = 3 Query: 174 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + ML G+A K +W+++ + GKP DKPN+ G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ W Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVW 260
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.418e-52 Identity = 106/255 (41.57%), Postives = 148/255 (58.04%), Query Frame = 3 Query: 174 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + ML G+A K +W+++ + GKP DKPN+ G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ W Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVW 260
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.418e-52 Identity = 106/255 (41.57%), Postives = 148/255 (58.04%), Query Frame = 3 Query: 174 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + ML G+A K +W+++ + GKP DKPN+ G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ W Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVW 260
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.418e-52 Identity = 106/255 (41.57%), Postives = 148/255 (58.04%), Query Frame = 3 Query: 174 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + ML G+A K +W+++ + GKP DKPN+ G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ W Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVW 260
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.418e-52 Identity = 106/255 (41.57%), Postives = 148/255 (58.04%), Query Frame = 3 Query: 174 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + ML G+A K +W+++ + GKP DKPN+ G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ W Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVW 260
BLAST of CK934056 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.418e-52 Identity = 106/255 (41.57%), Postives = 148/255 (58.04%), Query Frame = 3 Query: 174 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKXXXXXXXXXXXXXIMLAGLAFKRKWQQKRKEQGKPYDKPNIATGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 935 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + ML G+A K +W+++ + GKP DKPN+ G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ W Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVW 260 The following BLAST results are available for this feature:
BLAST of CK934056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934056 ID=CK934056; Name=CK934056; organism=Citrus sinensis; type=EST; length=937bpback to top |