CK934291

Overview
NameCK934291
Unique NameCK934291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1671 contig Csv1_Contig1671:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PAS2A_ORYSJ (Protein tyrosine phosphatase-like protein PASTICCINO 2A OS=Oryza sativa subsp. japonica GN=PAS2A PE=2 SV=2)

HSP 1 Score: 343.969 bits (881), Expect = 6.386e-94
Identity = 164/219 (74.89%), Postives = 184/219 (84.02%), Query Frame = 3
Query:  147 MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSK 803
            MAG  S +RRLYL+ YNW VF GWAQVLY A+ TL ESGHE VY AVERPLQ AQTAA LEILHGL+GLVRSP++ATLPQI SRL++TWGILWSFP+T +H            TEIIRYSFFGMKEA GFAPSWLLWLRYSTF++LYP+GI+SEVGLIY ALPY+K SE YCLRMPNKWNFSFD+FYA+IL L  YVPGSPHM+TYML QRKKAL+K+K
Sbjct:    1 MAGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYSFFGMKEAFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKASEKYCLRMPNKWNFSFDFFYASILSLAIYVPGSPHMFTYMLAQRKKALAKAK 219          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PAS2_ARATH (Protein tyrosine phosphatase-like protein PASTICCINO 2 OS=Arabidopsis thaliana GN=PAS2 PE=1 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 3.170e-93
Identity = 165/221 (74.66%), Postives = 189/221 (85.52%), Query Frame = 3
Query:  147 MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 809
            MAG LS++RR+YLT YNW VFAGWAQVLYLA+ TL E+G+ENVY A+E+PLQLAQTAAVLEILHGL+GLVRSP++ATLPQI SRL++TWGIL+SFP+ ++H            TEIIRYSFFG KEALGFAPSW LWLRYS+FLLLYP+GITSEVGLIY ALP+IK SE Y +RMPN  NFSFD+FYA ILVL  YVPGSPHMY YMLGQRK+ALSKSK+E
Sbjct:    1 MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYSVRMPNILNFSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 221          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PAS2B_ORYSJ (Protein tyrosine phosphatase-like protein PASTICCINO 2B OS=Oryza sativa subsp. japonica GN=PAS2B PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.332e-91
Identity = 160/219 (73.06%), Postives = 181/219 (82.65%), Query Frame = 3
Query:  147 MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSK 803
            M G  S +RRLYL+ YNW VF GWAQVLY A+ TL ESGHE VY AVERPLQ AQTAA LEILHGL+GLVRSP++ATLPQI SRL++TWGILWSFP+T +H            TEIIRYSFFGMKE  GFAPSWLLWLRYSTF++LYP+GI+SEVGLIY ALPY+K +E YCLRMPNKWNFSFD+ YA+IL L  YVPGSPHM+TYML QRKKAL+K+K
Sbjct:    1 MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYSFFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWNFSFDFSYASILSLAVYVPGSPHMFTYMLAQRKKALAKAK 219          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTPLA_MOUSE (Protein-tyrosine phosphatase-like member A OS=Mus musculus GN=Ptpla PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.442e-39
Identity = 81/212 (38.21%), Postives = 125/212 (58.96%), Query Frame = 3
Query:  159 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 791
            L LL   +LT YN  + AGW  +    ++   E G H  +YK++++ L+  QT A+LE++H L+G+V + +  T  Q+SSR+++ W I  S    QN             TEI RYSF+     L   P ++ W RY+ F++LYP G+  E+  IY ALPY+K+S  + +R+PNK+N SFDY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct:   61 LGLLATAWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEVVHCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEITRYSFYTFS-LLDHLPHFIKWARYNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 271          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTPLA_SHEEP (Protein-tyrosine phosphatase-like member A OS=Ovis aries GN=PTPLA PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.308e-38
Identity = 79/212 (37.26%), Postives = 126/212 (59.43%), Query Frame = 3
Query:  159 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 791
            L LL  ++LT YN  + AGW  +    ++   E G H+ +YK++++ L+  QT A+LEI+H L+G+V + +     Q+SSR+++ W +  S    QN             TEI RYSF+     L   P ++ W RY+ F++LYP G+  E+  IY ALPY+K++  + +R+PNK+N SFDY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct:   68 LGLLATIWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVLVAGVQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFS-LLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPYVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 278          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTPLA_CANFA (Protein-tyrosine phosphatase-like member A OS=Canis familiaris GN=PTPLA PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.308e-38
Identity = 80/212 (37.74%), Postives = 126/212 (59.43%), Query Frame = 3
Query:  159 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 791
            L LL  ++LT YN  + AGW  +    ++   E G H+ +YK++++ L+  QT A+LEI+H L+G+V + +     Q+SSR+++ W I  S    QN             TEI RYSF+     L   P ++ W RY+ F++LYP G+  E+  IY ALPY+K++  + +R+PNK+N SFDY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct:   29 LGLLATVWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVAGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFS-LLDHLPYFIKWARYNFFIILYPVGVVGELLTIYAALPYVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 239          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTPLB_MOUSE (Protein-tyrosine phosphatase-like member B OS=Mus musculus GN=Ptplb PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.446e-37
Identity = 79/210 (37.62%), Postives = 124/210 (59.05%), Query Frame = 3
Query:  180 YLTAYNWTVFAGWAQVLY-LALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 806
            YL  YN  + AGW  +   L    L +  + ++Y ++ERPL+  QT A+LEILH  +G+V S +  T  Q+ SR+++ W +  S  + Q+             TEIIRYSF+     L   P  + W RY+ F++LYP G+T E+  IY ALP+++++  Y + +PNK+NFSFDY    IL++  Y+P  P +Y +M+ QR+K LS +++
Sbjct:   41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFS-LLNHLPYIIKWARYTLFIVLYPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFLILIMISYIPLFPQLYFHMIHQRRKVLSHTEE 249          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTPLB_BOVIN (Protein-tyrosine phosphatase-like member B OS=Bos taurus GN=PTPLB PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.889e-37
Identity = 78/214 (36.45%), Postives = 126/214 (58.88%), Query Frame = 3
Query:  168 LRRLYLTAYNWTVFAGWAQVLY-LALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 806
            L   YL  YN  + AGW  +   L    L +  + ++Y ++E+PL+  QT A+LEILH  +G+V S +  T  Q+ SR+++ W +  S  + Q+             TEIIRYSF+     L   P  + W RY+ F++LYP G++ E+  IY ALP+++++  Y + +PNK+NFSFDY+   IL++  Y+P  P +Y +M+ QR+K LS +++
Sbjct:   37 LTTAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFS-LLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLILIMISYIPLFPQLYFHMIHQRRKILSHTEE 249          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTPLB_PONAB (Protein-tyrosine phosphatase-like member B OS=Pongo abelii GN=PTPLB PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.467e-37
Identity = 78/214 (36.45%), Postives = 126/214 (58.88%), Query Frame = 3
Query:  168 LRRLYLTAYNWTVFAGWAQVLY-LALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 806
            L   YL  YN  + AGW  +   L    L +  + ++Y ++E+PL+  QT A+LEILH  +G+V S +  T  Q+ SR+++ W +  S  + Q+             TEIIRYSF+     L   P  + W RY+ F++LYP G++ E+  IY ALP+++++  Y + +PNK+NFSFDY+   IL++  Y+P  P +Y +M+ QR+K LS +++
Sbjct:   38 LATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFS-LLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQRRKILSHTEE 250          
BLAST of CK934291 vs. ExPASy Swiss-Prot
Match: PTPLB_HUMAN (Protein-tyrosine phosphatase-like member B OS=Homo sapiens GN=PTPLB PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.467e-37
Identity = 78/214 (36.45%), Postives = 126/214 (58.88%), Query Frame = 3
Query:  168 LRRLYLTAYNWTVFAGWAQVLY-LALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 806
            L   YL  YN  + AGW  +   L    L +  + ++Y ++E+PL+  QT A+LEILH  +G+V S +  T  Q+ SR+++ W +  S  + Q+             TEIIRYSF+     L   P  + W RY+ F++LYP G++ E+  IY ALP+++++  Y + +PNK+NFSFDY+   IL++  Y+P  P +Y +M+ QR+K LS +++
Sbjct:   37 LATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFS-LLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQRRKILSHTEE 249          
The following BLAST results are available for this feature:
BLAST of CK934291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PAS2A_ORYSJ6.386e-9474.89Protein tyrosine phosphatase-like protein PASTICCI... [more]
PAS2_ARATH3.170e-9374.66Protein tyrosine phosphatase-like protein PASTICCI... [more]
PAS2B_ORYSJ1.332e-9173.06Protein tyrosine phosphatase-like protein PASTICCI... [more]
PTPLA_MOUSE3.442e-3938.21Protein-tyrosine phosphatase-like member A OS=Mus ... [more]
PTPLA_SHEEP1.308e-3837.26Protein-tyrosine phosphatase-like member A OS=Ovis... [more]
PTPLA_CANFA1.308e-3837.74Protein-tyrosine phosphatase-like member A OS=Cani... [more]
PTPLB_MOUSE1.446e-3737.62Protein-tyrosine phosphatase-like member B OS=Mus ... [more]
PTPLB_BOVIN1.889e-3736.45Protein-tyrosine phosphatase-like member B OS=Bos ... [more]
PTPLB_PONAB2.467e-3736.45Protein-tyrosine phosphatase-like member B OS=Pong... [more]
PTPLB_HUMAN2.467e-3736.45Protein-tyrosine phosphatase-like member B OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_B03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934291 ID=CK934291; Name=CK934291; organism=Citrus sinensis; type=EST; length=850bp
GGGGGAAAGTGGTTGAGCAGCTTACCTGTCTCTTCTCACTTCGCACCCAT
CCCCATCTCCCTTAATTGCTGTCGTTTTAAATGGTCTAAATTTTCTCTTT
TAATTGCTTCCCAGTTTACAATCTTTCAATTTTCAATACAAAACAGATGG
CGGGTTGTTTGTCGCTTCTCAGACGCCTGTACCTCACTGCCTACAACTGG
ACCGTCTTTGCCGGATGGGCCCAGGTTTTGTACCTTGCTTTGAAGACCTT
AAACGAGTCCGGCCACGAAAATGTCTACAAAGCCGTCGAAAGGCCTCTCC
AGCTCGCCCAAACCGCCGCCGTTTTGGAGATTCTTCATGGTCTTCTAGGC
TTGGTGAGATCTCCAATAACAGCTACACTGCCACAAATTAGCTCTAGATT
GTATGTTACATGGGGCATTTTATGGAGTTTTCCTCAGACTCAGAATCATA
TACTTGTTAGTTCATTGGTGATCAGCTGGTCCTTAACTGAGATTATTCGC
TACTCTTTCTTTGGCATGAAGGAGGCACTTGGTTTTGCACCTTCATGGCT
CTTGTGGCTGAGGTATAGCACATTTTTGCTGTTGTATCCATCTGGCATTA
CGAGTGAAGTTGGTCTTATTTACACTGCCCTTCCATACATAAAAGAATCC
GAGACGTATTGTCTTAGAATGCCAAACAAATGGAATTTCTCTTTTGACTA
CTTCTACGCTGCAATTCTTGTGCTTGGATTCTATGTGCCAGGTAGTCCTC
ATATGTATACATATATGCTTGGGCAGAGGAAGAAAGCCCTTTCGAAATCG
AAAAAAGAGTAAAATGGTTTTTTAACTGCAATGNNNNNNAGTGTATCCTA
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