CK934363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: WDR18_BOVIN (WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.420e-29 Identity = 82/238 (34.45%), Postives = 125/238 (52.52%), Query Frame = 3 Query: 126 MELLIASSSVADA-GIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWS-KPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPAEHVFXXG 833 ME+ + + S A W+L SGA L Y+ + P GLA + +L ++QL I W K Q++ K + P+ + + +G Y+ G S +IY+WEV++G LL HY+ V+CL F+ D S ISG +D V WSL +V + S+ + H ++ HTL ITD+ G+GG A + +AS D+T K+W + G LL +++F I A+ D AEH G Sbjct: 5 MEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL------GKNYICAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAG-ISENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDCLVLAWSLCSVLQADPSRTPAPR--HVWSRHTLPITDLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCG 233
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: WDR18_RAT (WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28 Identity = 78/240 (32.50%), Postives = 125/240 (52.08%), Query Frame = 3 Query: 126 MELLIASSSVADA-GIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWS---KPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPAEHVFXXG 833 ME+++ + S A W+L SGA L Y+ + P GLA + +L ++Q G +W K Q++ K + P+ + +G Y+ G + IY+WEV++G LL HY+ V+CL F+ DGS +S +D V WSL +V + S+ + H ++ HTL ITD+ G+GG A + +AS D+T K+W++ G LL +++F I ++ D AEH G Sbjct: 5 MEVVVCTDSAAPLWSCMVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ--------QGKNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLAG-IAESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGSHFVSAGKDCLVLAWSLCSVLQADPSRILAPR--HVWSQHTLPITDLHCGFGGPMARVATASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCG 233
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: WDR18_HUMAN (WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28 Identity = 80/239 (33.47%), Postives = 126/239 (52.72%), Query Frame = 3 Query: 126 MELLIASSSVADAGIGC--WDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWS-KPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPAEHVFXXG 833 ME+ + + S A C W+L SGA L Y+ + P GLA + +L ++QL I W K Q++ K + P+ + A+ +G Y+ G + I++WEV++G LL HY+ V+CL F+ D S ISG +D V +WSL +V + S+ + H ++ H L ITD+ G+GG A + ++S D+T K+W + G LL +++F I A+ D AEH G Sbjct: 5 MEVAVCTDSAAPMW-SCIVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL------GKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAG-VAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIPAP--RHVWSHHALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCG 233
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: WDR18_MOUSE (WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.868e-27 Identity = 76/240 (31.67%), Postives = 123/240 (51.25%), Query Frame = 3 Query: 126 MELLIASSSVADA-GIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWS---KPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPAEHVFXXG 833 ME+++ + + A W+L SGA L Y+ + P GLA + +L ++Q G +W K Q++ K + P+ + +G Y+ G + IY+WEV +G LL HY+ V+CL F+ DGS +S +D WSL +V + S+ + H ++ HTL ITD+ G+GG A + +AS D+T K+W++ G LL +++F I ++ D AEH G Sbjct: 5 MEVVVCTDAAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ--------QGKNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLAG-IAESIYLWEVCTGNLLVILSRHYQDVSCLKFTGDGSHFVSAGKDCLALAWSLCSVLQADPSRILAPR--HVWSQHTLPITDLHCGFGGPMARVATASLDQTVKLWAISSGDLLLSVLFDMGITSVTMDLAEHHIFCG 233
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: IPI3_DEBHA (Pre-rRNA-processing protein IPI3 OS=Debaryomyces hansenii GN=IPI3 PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.424e-21 Identity = 55/147 (37.41%), Postives = 83/147 (56.46%), Query Frame = 3 Query: 408 IAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIW---SLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGV--SATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPAEHVFXXG 833 +AGG ++G IY+WE+ASG LL AHY+A+T + FSQ G+FL+SGS D +W L++V+ + E + SFT H+L ITD+ I G+ + + S D T +++ ++ LL V PS I+ + DPA G Sbjct: 121 LAGGSKTGKIYVWELASGNLLCVKEAHYQAITAIKFSQCGTFLVSGSSDARCMVWRTSDLISVYNKDEESSINIKPFASFTDHSLPITDLAISEAGIISDLRLYTVSRDSTLRIYDIMTKSLLTTFVLPSGIECVTKDPANRACYVG 267
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: IPI3_SCHPO (Pre-rRNA-processing protein crb3/ipi3 OS=Schizosaccharomyces pombe GN=crb3 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.429e-21 Identity = 69/243 (28.40%), Postives = 120/243 (49.38%), Query Frame = 3 Query: 126 MELLIASSSVAD---AGIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASSGSILYWSWSKPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEE---CESQRASHLYLHSFTGHTLRITDIVIGYGG-VSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPAEHVFXXG 833 MELL++ + + + C +L +G ++ +SP C L S+Q +P + ++ K ++ + E + + ++ G+++A G + G++Y+W + SG L+ + AHY+ +T L FS DG L + S DG V W + T+ ++ E+ +S + F+GH I + IG G VS + +ASED T ++W + G LL I PS + DP+E V G Sbjct: 1 MELLLSGCEAIEGEPSNVLCHNLHTGTLVSTFRQ-SSPAKNATCTTLNHLLSAQ-HTRPQLN-----IHNFGKEILDQSIILPEILICVQSSPCGSWLAAGTEKGNLYIWSLKSGALIYFFRAHYQPLTILKFSNDGMVLFTASNDGDVFAWLISTLVDQNSTFETSNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRLYTASEDNTIRIWDVSTGNLLTTIALPSTPSCMTVDPSERVVYVG 236
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: IPI3_USTMA (Pre-rRNA-processing protein IPI3 OS=Ustilago maydis GN=IPI3 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18 Identity = 58/188 (30.85%), Postives = 95/188 (50.53%), Query Frame = 3 Query: 288 QPSASSGSILYWSWSKPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWS---LLTVFEECESQRASHLY----LHSFTGHTLRITDIVIGYGGV--SATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPAEHVF 824 Q ++ ++ +SW + + + + + IA + +G +AGG G I +W++A+G LL + AHYR+VT L ++ DG+ L++GSED + +WS LL ++ S S + + H L ITD+ I G A ++S+S D + K+W L LL VF I + D E F Sbjct: 78 QLESNKAALNIFSWQRDHLLQRIILPSKLSCIACSPNGDLVAGGSFDGRILLWQIATGDLLASFDAHYRSVTVLKWTCDGAGLLTGSEDARILVWSLAGLLAPHDQTSSSITSSEHNPAPYCTLADHNLAITDLDISSGRFPHQAMVLSSSSDASVKLWDLRTRSLLSTFVFEQPIHRVVLDCTERFF 265
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: IPI3_PICST (Pre-rRNA-processing protein IPI3 OS=Pichia stipitis GN=IPI3 PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.287e-18 Identity = 53/149 (35.57%), Postives = 85/149 (57.05%), Query Frame = 3 Query: 408 IAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIW---SLLTVF--EECESQRASHLYLHSFTGHTLRITDIVIGYGGV--SATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPAEHVFXXG 833 +AGG +SG IY+WE++SG LL AHY+ VT + FS+ G+FL++GS+D +W L+ VF + ES R YL + T +TL +TD+V+ GV + + S D T +++ ++ +LL + I+++ DPA G Sbjct: 122 LAGGSKSGKIYVWELSSGSLLCVKEAHYQNVTVVKFSKCGTFLVAGSDDARCTVWKTLDLIAVFDGDNDESSRNFKPYL-AITDNTLAVTDLVLNEPGVINDLKLYTVSRDNTLRIYDIITKQLLTTFILSEAIESVVADPAGRAVYVG 269
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: IPI3_YARLI (Pre-rRNA-processing protein IPI3 OS=Yarrowia lipolytica GN=IPI3 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.599e-18 Identity = 66/225 (29.33%), Postives = 121/225 (53.78%), Query Frame = 3 Query: 129 ELLIASSSVADAGIGCWDLESGAEQLRYKSCASPPHGLACV-----GQRFLASSQLREQPSASSGSILY-WSWSKPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVSAT-IVSASEDRTCKVWSLLKGRLLRNIVFPS 782 EL+I +++ + DL SG +K+ + P+ + G L S+Q + G++++ ++W++ V+ + + E + +AA++ GT++AGG SG +++WE+ASG+L+ HY+AVT L F+ DG L S S+D V WSL+T+ + + + ++T H L + D+V+G G T + + S D+T ++W + LL I P+ Sbjct: 3 ELIIYTTNKGACAV---DLHSGNNITHFKNDETAPNLSVFLTNTPSGNPLLFSAQTK-------GAMMHVYNWNRESVDQQIVLPEKLSCLAASTCGTWLAGGSASGRLFVWELASGKLVFSREVHYQAVTKLAFT-DG-LLFSTSKDARVLGWSLVTMASDPKDCQP----CITWTEHNLGVVDLVVGGGPTRDTRVFTVSTDKTVRIWDVSSTALLTTITLPA 211
BLAST of CK934363 vs. ExPASy Swiss-Prot
Match: IPI3_PICGU (Pre-rRNA-processing protein IPI3 OS=Pichia guilliermondii GN=IPI3 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.550e-18 Identity = 57/191 (29.84%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 294 SASSGSILYWSWSKPQVEVKSLPAEPIKPIAANSHGT---------------YIAGGGQSGDIYMWEVASGRLLKKWHAHYRAVTCLVFSQDGSFLISGSEDGCVRIWSL--LTVFEECESQRASHLYLHSFTGHTLRITDIVIGYGGVS-ATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIAWDPA 812 + S I +SW K + + EP+ +A H + +AGG SG +Y+WE++SG L+ AHY+A+ L FS+ G++L+SG D +W L ++ E+Q+ + +F HTL +TDI + G S + S+S+D T + + + G+L+ V P ++ +A DPA Sbjct: 54 AGSKPLITVYSWGKESPDQRIPVPEPLTCMALCKHPSNEKINHKVPTFQLPWLLAGGSASGKLYIWELSSGNLVCVKEAHYQAINVLKFSECGTYLVSGGADARCSVWKTLDLVTIDDPETQKTASAL--TFMDHTLAVTDIWLTTGIRSDIRLYSSSKDGTVRNYDITSGKLITTFVLPLSVECLAVDPA 242 The following BLAST results are available for this feature:
BLAST of CK934363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934363 ID=CK934363; Name=CK934363; organism=Citrus sinensis; type=EST; length=835bpback to top |