CK934429

Overview
NameCK934429
Unique NameCK934429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6290 contig Csv1_Contig6290:91..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934429 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.312e-20
Identity = 63/164 (38.41%), Postives = 90/164 (54.88%), Query Frame = 2
Query:   65 LKSTLEYKLIPVLDGAGGFSTHLG--TNGQCPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIG-VSSKDGVRRLAL 532
            L++ ++Y ++  + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G++G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  S  DG  RLAL
Sbjct:   39 LQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CK934429 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 6.246e-19
Identity = 64/175 (36.57%), Postives = 94/175 (53.71%), Query Frame = 2
Query:   65 LKSTLEYKLIPVLDGAGGFSTHLGT--NGQ--CPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGV-SSKDGVRRLALVGDDEP 550
            L++   Y ++PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG++G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+   + G RRLAL   D+P
Sbjct:   44 LRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL--SDKP 209          
The following BLAST results are available for this feature:
BLAST of CK934429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC3.312e-2038.4121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU6.246e-1936.57Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionCGF1004259_C08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934429 ID=CK934429; Name=CK934429; organism=Citrus sinensis; type=EST; length=807bp
GGGCTGGTTTCTTGATTCTCCTTTTGAACTTGGGCACTTTGCTCCCTTCT
CTAGCTTCTGACTGCTCAAATCCACCCTCGAGTATAAACTTATCCCAGTC
CTAGATGGCGCCGGTGGATTCAGCACACACCTAGGCACAAATGGGCAGTG
TCCCTTGGACGTTATCCAATTAAGTTCTCCTAGCGAAAGGGGAGATAATT
TAAGATTACTTCCGTACGACAATTACAAAATTGTCAAGGTATCCACTGAT
GTCAACCTGAGATTCCCCGTAAAAGTTTCTGTTAAGCCCTGTAATGAAGA
ACCATTGTGGAAAGTTGATAGCTATGACGATCCATTAATTGTAACCGGCG
GGATTGAGGGCCACCCAGGAGCTGAAACGTTGCTAAATTGGTTTAAGATT
GAGAAAGCTGGAAATTTTTCATATGGTGGTGTATACAATATTGTCCATTG
TCCGAGTGTCTGTCTTTCTTGTCCTAGACGCTGCAACAAAATTGGCGTTT
CTTCTAAGGATGGCGTTCGACGTCTGGCTCTAGTTGGTGATGATGAACCG
GCTTTGAATGTTCTGTTTTTTCCATCAGAGGAAAGATCAAGGCTACTTCA
AGCTGCTAACGCAATATCAAGGTTTTTTGAAGCTGCTGAAGCAATATCAA
TGGCCGCGTAATGAATGAACTAGCTGTATCATTCTAAATAATAGACCAGG
CTAGTAACCTTTTATCTCTATTACAGAATAAAAATAACACCGCCTGTGAT
CCTTTTGCTGTTGTTAATCTCTACTCATGGTATGTATACATCTTTTAAGT
CTCCATG
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