CK934430

Overview
NameCK934430
Unique NameCK934430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: YI01_SCHPO (Putative amidase C869.01 OS=Schizosaccharomyces pombe GN=SPAC869.01 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.649e-55
Identity = 115/220 (52.27%), Postives = 156/220 (70.91%), Query Frame = 3
Query:  147 SNAIHAFP--------IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGLT 779
            +N+ + FP        + +ATI  LQ   +   LTS  +V  YL    ++NP ++G++++NPD L+ A + D ER   A G +RG LHGIP ++KDN ATKDKM+TTAGSYALL S+VPRDA VV +LR+AGA++ G A+LSEW++ RS+    G+S RGGQ + P+ L+ +P GSSSGSAISVA+N+ A +LGTETDGSI+ P+  N VVGLKP +GLT
Sbjct:   50 TNSTNIFPMPKCQNITLEDATIDQLQNYMENGILTSTDIVHCYLDRYLQVNPYVNGILQLNPDVLTIASELDDER---ANGIIRGPLHGIPFIVKDNFATKDKMDTTAGSYALLGSIVPRDAYVVKQLREAGAVLFGHATLSEWADMRSNDYSEGYSARGGQSRCPFNLTVNPGGSSSGSAISVASNMIAFALGTETDGSIIDPAMRNGVVGLKPTVGLT 266          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ACIBS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain SDF) GN=gatA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.802e-26
Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 3
Query:  171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++   +S+     S   G   NP+ L   P GSS GSA +VA +LA  + GT+T GSI  P+S   + GLKP  G
Sbjct:    4 LHRLSIRELAKGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALCEADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFAMGSTSE-----SSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYG 196          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ACIBY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AYE) GN=gatA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.965e-26
Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 3
Query:  171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++   +S+     S   G   NP+ L   P GSS GSA +VA +LA  + GT+T GSI  P+S   + GLKP  G
Sbjct:    4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFAMGSTSE-----SSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYG 196          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ACIBC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain ACICU) GN=gatA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.965e-26
Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 3
Query:  171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++   +S+     S   G   NP+ L   P GSS GSA +VA +LA  + GT+T GSI  P+S   + GLKP  G
Sbjct:    4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFAMGSTSE-----SSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYG 196          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ACIB5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AB0057) GN=gatA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.965e-26
Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 3
Query:  171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++   +S+     S   G   NP+ L   P GSS GSA +VA +LA  + GT+T GSI  P+S   + GLKP  G
Sbjct:    4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFAMGSTSE-----SSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYG 196          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ACIB3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AB307-0294) GN=gatA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.965e-26
Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 3
Query:  171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++   +S+     S   G   NP+ L   P GSS GSA +VA +LA  + GT+T GSI  P+S   + GLKP  G
Sbjct:    4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFAMGSTSE-----SSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYG 196          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PROMT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL2A) GN=gatA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.464e-25
Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 3
Query:  183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            T +DL+   K  +++S++LV+  +  I+ L+P L+  + VN + ALS+A+  D  +++ +   L  L GIPI +KDN+ TK  + TT  S  L   V P ++ V  KL  AGAI++GK ++ E++   SS   S F    G   NP+ ++  P GSS GSA SVA  L   SLG++T GSI  P+S   VVG+KP  G
Sbjct:    2 TFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHID--KQIASGDHLPPLSGIPIAIKDNLCTKG-IKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMDEFA-MGSSTETSAF----GPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYG 191          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PROM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL1A) GN=gatA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.464e-25
Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 3
Query:  183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            T +DL+   K  +++S++LV+  +  I+ L+P L+  + VN + ALS+A+  D  +++ +   L  L GIPI +KDN+ TK  + TT  S  L   V P ++ V  KL  AGAI++GK ++ E++   SS   S F    G   NP+ ++  P GSS GSA SVA  L   SLG++T GSI  P+S   VVG+KP  G
Sbjct:    2 TFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHID--KQIASGDHLPPLSGIPIAIKDNLCTKG-IKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMDEFA-MGSSTETSAF----GPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYG 191          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHRSD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gatA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.203e-25
Identity = 79/202 (39.11%), Postives = 113/202 (55.94%), Query Frame = 3
Query:  171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            + + T+ +L    +  + +SR+L +  L  I RL+  L+  I V  + AL+ AD AD  R   A+G    L G+P+ LKD   T+  + T+ GS  L   V P DA VV K+R+AG + LGK ++ E++   SS   S +    G  KNP+ LSA P GSS GSA +VA  L   +LGT+T GSI  P++   + GLKP  G
Sbjct:    1 MHDKTLTELAAGLRAGEFSSRELCQSALDRIQRLDGDLNSFISVTAEQALADADAADQAR---ASGDAAALAGLPLALKDIFCTQG-VRTSCGSKMLDSFVAPYDATVVEKIRQAGGVSLGKTNMDEFA-MGSSNENSFY----GPVKNPWDLSAVPGGSSGGSAAAVAAGLVPAALGTDTGGSIRQPAAFCGITGLKPTYG 193          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ALHEH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=gatA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.203e-25
Identity = 79/202 (39.11%), Postives = 113/202 (55.94%), Query Frame = 3
Query:  171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            + E T+ ++  A +  + +SR++ E +L  I  LNP+ + VI   P+ AL+ AD AD      AAG    L G+P++ KD   T+  + T+ GS  L     P DA VV KL  AG ++LGKA++ E++   SS   S +    G  KNP+ L A P GSS GSA +VA  LA  + GT+T GSI  P++   + GLKP  G
Sbjct:    1 MHEKTVAEIAAALRAGEFSSREVTEAFLARIDALNPVTNAVITPTPEQALAAADAADQRI---AAGEAGPLTGVPLVHKDIFCTQG-VRTSCGSRMLDNFTAPYDATVVGKLADAGMVMLGKANMDEFA-MGSSNETSYY----GPVKNPWDLDAVPGGSSGGSAAAVAGRLAPAATGTDTGGSIRQPAALCGLSGLKPTYG 193          
The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YI01_SCHPO6.649e-5552.27Putative amidase C869.01 OS=Schizosaccharomyces po... [more]
GATA_ACIBS3.802e-2639.11Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ACIBY4.965e-2639.11Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ACIBC4.965e-2639.11Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ACIB54.965e-2639.11Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ACIB34.965e-2639.11Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_PROMT2.464e-2539.39Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_PROM12.464e-2539.39Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_CHRSD4.203e-2539.11Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_ALHEH4.203e-2539.11Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_C09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bp
GCGGGGATCCATCTCATCCAACTCCGAGCCNNNCAAAGTGACCATCGATG
CATTGCCTAAAAATGGCTACCAGTAGTATCGCAATACTGGCCTTTTCTTT
GTTTTCCCATCTGCTCCTTCCGACTCTTCTAGCCATATCAGCTCAAAGTA
ATGCCATTCATGCATTCCCAATAAGAGAAGCAACCATCAAGGATCTCCAG
CTCGCTTTCAAGCAAAACAAGCTCACGTCCCGGCAGCTGGTTGAATTTTA
CCTCGGAGAAATCCACAGGCTCAACCCGCTGCTTCACGGCGTCATAGAGG
TGAACCCCGATGCACTATCCCAAGCTGATAAGGCTGACTACGAGCGCAAG
GTTAAGGCAGCAGGCTCACTGCGGGGCTTGCACGGGATTCCTATTCTTCT
TAAGGATAACATTGCAACGAAGGACAAGATGAACACCACTGCTGGCTCGT
ATGCTCTGCTCCGCTCAGTCGTGCCCCGGGATGCTGGTGTGGTGGTGAAG
TTGAGGAAAGCTGGTGCCATTATTTTGGGAAAGGCCAGCTTGAGTGAGTG
GTCTAACTTTAGATCCTCCAAAGCACCCAGTGGTTTCAGTGGTAGGGGGG
GCCAGGGAAAGAATCCATATGTTCTATCAGCAGATCCTTGTGGGTCAAGC
AGTGGCTCAGCAATTTCAGTAGCTACAAACTTGGCTGCCGTGTCACTGGG
AACTGAAACGGATGGTTCCATTCTATGTCCGTCCAGTTCTAACTCAGTAG
TGGGACTCAAACCAGCCCTTGGTCTCACCA
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