CK934435

Overview
NameCK934435
Unique NameCK934435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10323 contig Csv1_Contig10323:1..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK934435 vs. ExPASy Swiss-Prot
Match: PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.624e-11
Identity = 35/81 (43.21%), Postives = 43/81 (53.09%), Query Frame = 1 
Query:  415 IDTLKLGACVDLLGGLVHIGLGDPVVNQCCPVLQGLVELEAAVXXXXXXXXXXXXXXXXXXXXXXXXV-TCGKTPPAGFTC 654
            ID LKLGACVD+LGGL+HIG+G      CCP+L GLV+L+AA+                        +  CGK PP  F C
Sbjct:  263 IDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKC 343
The following BLAST results are available for this feature:
BLAST of CK934435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PRF1_SOLLC3.624e-1143.2136.4 kDa proline-rich protein OS=Solanum lycopersi... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004259_B06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934435 ID=CK934435; Name=CK934435; organism=Citrus sinensis; type=EST; length=949bp
GGGGATCACTCTCTCTTTGTTACAACTTACAACAACAGAAAGAAGAGAGA
TTTAAAATAAAGAAAAAAAAAAAAAAATGGACTCCTCCAAACTCTCAGCT
CTCCTCATCATTTGCATGCTTTTCATCTCCACAGCCACTCCCATTCTGGC
TGTGGCACGTGTGGCAAGCCGCACCCGAAGCACAGGAAACCTAGGCAGCC
TAGACCCATCAGTCTTCCTCCCATTGTCAAACCCCCAGTTCCCTTGCCAC
CAGTCACTCTCCCTCCGGTGACCGTCCCGCCGATCAAGCCACCAGTCGAC
CTCCCCACTCTCCCACCAGTTACACTGCCTCCAGTTCTCCCTAACCCACC
AAGTGCTAGGAAGCCATGCCCATGTTCATACACACCACCTCCACCAGCTG
CTGCCACATGCCCCATTGACACCCTCAAATTGGGTGCTTGTGTGGACCTT
CTTGGTGGGTTGGTTCACATTGGTCTTGGTGACCCAGTTGTTAACCAATG
CTGCCCAGTTCTACAAGGACTTGTTGAGTTAGAAGCTGCTGTCTGCTTGT
GCACTACTCTCAAGCTCAAGCTGCTTAATCTTAACATCTATCTTCCACTT
GCTCTTCAGCTTCTTGTCACTTGCGGAAAGACACCACCCGCTGGTTTCAC
TTGCACTCTTTAGATCTAAGGTTGGTAGATTGATGATGGATACTGAAGGA
AGAAATCGACATGAAAGGATGTCGAGACTTATTTGTTTGTTTCTTTTTCT
CTCTCCCCCACTCTCTCTGTCTTTCTCTCATTGTTGGGATTGTAATGTTT
GGTCACATTTAATTGTACACCCATTTGTTTTTATATGATTTGTCGCATTG
TATGTGTGTTTTCAATGTCCTTTGACAGGCAGCAATTATTTGATTTTCCT
ACCTCCNAAANNNAAAAAANNAAAAAAAAAAAAAAAAAAAANNNNAAAA
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