CK934561

Overview
NameCK934561
Unique NameCK934561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1702 contig Csv1_Contig1702:1..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK934561 vs. ExPASy Swiss-Prot
Match: B3GTG_ARATH (Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.193e-13
Identity = 28/46 (60.87%), Postives = 40/46 (86.96%), Query Frame = -1 
Query:  692 VHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDHRAFCCE 829
            V Y++D RF+N+ C+S+YIL HYQ PR++LCLWEKLQK++++ CCE
Sbjct:  574 VKYINDKRFHNSDCKSNYILVHYQTPRLILCLWEKLQKENQSICCE 619
The following BLAST results are available for this feature:
BLAST of CK934561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B3GTG_ARATH9.193e-1360.87Probable beta-1,3-galactosyltransferase 16 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004229_E03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934561 ID=CK934561; Name=CK934561; organism=Citrus sinensis; type=EST; length=829bp
GGGGATGATGCGTGCAGTTACTTATATTTGTCTTTGTTTTCAGTTGAGTA
GCTACCTCAAGAGGTGAGGTGGCAATGGCATAGCGTTCATTTACGTGCCT
TAATGAAAATCACTTGCTCGGCTCCGAGCTTCTTGTCTTGGTCTTAGCCT
TGCTTGATGTATGTTTTCGTCAATGGTTTGAATTGAGTTTTTAATGATCC
ATCTTATTATTTGATTACCCTTCAGTGATTCGCACGCATCCTCCGAGCTG
TAGGCCAACAAAACTTAAAGCTAAAAGTCAACCAAAAGACAATTTTTTGT
TTCGCCTTCTTAACTTCTCGTCTTTATCAAGATTTGCAAGTGAACAACGT
ATTGCATGTGATTGGATACACAGGAAGATTAAGTACTGGAACAAGTGCCA
AGTAGTGGAACAAATGGCTTCCACGAGTTTCAGAAAGATGATAAGAACAT
CGGAAACGAGTCTATAATCACACCAACAATAGGTAACGAATAAGGAATGA
ACAAAGTAATAACACCATCTTTTGCCTAATTACAAAAGCTCAAACAGCAA
GCACGAGTTCTATCTCAGTCCAATCTTGCTGAAGCAAGCTCAAATCCAGA
ATCCCCGGCACGGTTTTGTAGAGCTGCTGAGTTGGGTTCATCAGTGTTAA
CCCATTGAAAACTTTTTGTGTCTCAGTGAGGTTGACACTTACTCGCAGCA
GAAAGCCCGGTGATCTTTCTGCAGCTTCTCCCAGAGGCATAACACCATTC
TGGGGCCTTGGTAATGGGCAAGAATATAATCCGATTCACATCCAGCATTG
TAGAACCTGTCGTCACTCATGTAATGCAC
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