CK934562

Overview
NameCK934562
Unique NameCK934562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1703 contig Csv1_Contig1703:1..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.768e-41
Identity = 82/166 (49.40%), Postives = 113/166 (68.07%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            PAD+ MVRMQADG+LP   RRNYK+V D I ++ ++EG+ SLW+G S  + RAM +TA Q+++YDQ K+++L  G   D + TH+ AS  A  VA+VA++P+DVI TR+MN       +  YKG  DC  KT+RAEG  A YKGF P   R GP T++ F+ +EQ+
Sbjct:  141 PADLTMVRMQADGKLPFNLRRNYKNVFDGIFRISKEEGIISLWKGCSPNLIRAMFMTAGQVSSYDQTKQLMLASGYFHDDIKTHLIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYKGTFDCLSKTLRAEGFKAFYKGFNPYFMRLGPQTILTFIFVEQL 306          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.155e-40
Identity = 82/166 (49.40%), Postives = 116/166 (69.88%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            PA+VA++RM ADGRLP+ QRR YK+V +A+ ++ R+EGV +LWRG   T+ RA++V A+QLA+Y Q K+ +L  G   D +  H  AS  +GLV + AS PVD++ TR+ NM+++ G+ P YK  LD  LK VR EG  +L+KGF P  +R GP TV+ F+ LEQ+
Sbjct:  139 PAEVALIRMTADGRLPADQRRGYKNVFNALVRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGK-PEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQM 303          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.276e-39
Identity = 81/166 (48.80%), Postives = 114/166 (68.67%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            PA+VA++RM ADGRLP+ QRR YK+V +A+ ++ R+EGV +LWRG   T+ RA++V A+QLA+Y Q K+ +L  G   D +  H  AS  +GLV + AS PVD+  TR+ NM+++ G+ P YK  LD   K VR EG  +L+KGF P  +R GP TV+ F+ LEQ+
Sbjct:  139 PAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRMIDGK-PEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQM 303          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.667e-39
Identity = 80/166 (48.19%), Postives = 116/166 (69.88%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            PA+VA++RM ADGRLP  QRR YK+V +A+ +++++EGV +LWRG   T+ RA++V A+QLA+Y Q K+ +L  G   D +  H  AS  +GLV + AS PVD++ TR+ NM+++ G+ P YK  LD  +K VR EG  +L+KGF P  +R GP TV+ F+ LEQ+
Sbjct:  139 PAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGK-PEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQM 303          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: M2OM_RAT (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 6.335e-39
Identity = 80/166 (48.19%), Postives = 113/166 (68.07%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            PA+VA++RM ADGRLP+ QRR YK+V +A+ ++ R+EGV +LWRG   T+ RA++V A+QLA+Y Q K+ +L  G   D +  H  A   +GLV + AS PVD++ TR+ NM+++    P YK  LD  LK VR EG  +L+KGF P  +R GP TV+ F+ LEQ+
Sbjct:  139 PAEVALIRMTADGRLPADQRRGYKNVFNALIRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCAIMISGLVTTAASMPVDIVKTRIQNMRMI-DEKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQM 303          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.860e-33
Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVA-GRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            NP DV  +RMQA              +ID+   + +QEG   LW+G SLT  RA IV   +L  YD  K+ ++  G+M D + TH  +SF  GLV ++ASNPVDV+ TR+MN + +  GR   YKG LDC L+T + EG  ALYKGF P   R GP+ ++ F+T EQ++
Sbjct:  125 NPTDVLKIRMQAQNSAVQG------GMIDSFMSIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTRMMNQRALRDGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLK 287          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.796e-32
Identity = 73/169 (43.20%), Postives = 99/169 (58.58%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAG-RDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            NP DV  +RMQA G L          +I     + +QEG   LW+G SLT  RA IV   +L  YD  K+ ++  G+M D + TH  ASF  GL  ++ASNPVDV+ TR+MN + +    +  YKG LDC L+T + EG  ALYKGF P   R GP+ ++ F+T EQ++
Sbjct:  125 NPTDVLKIRMQAQGSLIQG------GMIGNFINIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLASFTCGLAGALASNPVDVVRTRMMNQRSIRNVSNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 287          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 9.796e-32
Identity = 71/167 (42.51%), Postives = 103/167 (61.68%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            PAD+  VRMQ D +LP  QRRNY   +D + ++ R+EG+  L+ G+++  +R  +VT  QL+ YDQ K+++L  G + D + TH  ASF AG  A+    P+DV+ TR+MN K        Y+G   CA++T +  GP+A YKG +P   R  P TV+ FV LEQ+R
Sbjct:  119 PADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSK------GEYQGVFHCAVETAKL-GPLAFYKGLVPAGIRLIPHTVLTFVFLEQLR 278          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: KMCP1_RAT (Kidney mitochondrial carrier protein 1 OS=Rattus norvegicus GN=Slc25a30 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.850e-31
Identity = 73/169 (43.20%), Postives = 99/169 (58.58%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVA-GRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            NP DV  +RMQA              +I     + +QEG   LW+G SLT  RA IV   +L  YD  K+ ++  G+M D + TH  +SF  GLV ++ASNPVDV+ TR+MN + +  GR   YKG LDC L+T + EG  ALYKGF P   R GP+ ++ F+T EQ++
Sbjct:  125 NPTDVLKIRMQAQNSAVQG------GMIGNFISIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVSTHFLSSFTCGLVGALASNPVDVVRTRMMNQRDLRDGRCSGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLK 287          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: KMCP1_MACFA (Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.850e-31
Identity = 74/169 (43.79%), Postives = 99/169 (58.58%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVA-GRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            NP DV  +RMQA              +I     + +QEG   LW+G SLT  RA IV   +L  YD  K+ ++  G+M D + TH  +SF  GL  ++ASNPVDV+ TR+MN +V+  GR   Y G LDC L+T + EG  ALYKGF P   R GP+ ++LFVT EQ++
Sbjct:  125 NPTDVLKIRMQAQSSTIQG------GMIGNFMNIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLQDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIILFVTYEQLK 287          
The following BLAST results are available for this feature:
BLAST of CK934562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
M2OM_DICDI6.768e-4149.40Probable mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_MOUSE1.155e-4049.40Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_HUMAN1.276e-3948.80Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_BOVIN1.667e-3948.19Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_RAT6.335e-3948.19Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
KMCP1_MOUSE8.860e-3343.79Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
KMCP1_XENTR9.796e-3243.20Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
DIC_HUMAN9.796e-3242.51Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
KMCP1_RAT2.850e-3143.20Kidney mitochondrial carrier protein 1 OS=Rattus n... [more]
KMCP1_MACFA2.850e-3143.79Kidney mitochondrial carrier protein 1 OS=Macaca f... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934562 ID=CK934562; Name=CK934562; organism=Citrus sinensis; type=EST; length=751bp
GGGGTAGCGGCCGGTTTGATCGCCGGAGCAGTTGGGGCCACCGTTGGCAA
CCCCGCTGACGTGGCAATGGTCCGCATGCAAGCCGACGGCCGCCTCCCAT
CGGCTCAGCGGCGTAACTACAAGAGCGTAATCGACGCGATCGCGCAAATG
TTGAGGCAAGAGGGGGTCGCCAGTCTTTGGCGCGGGTCATCGCTGACGGT
GAACCGGGCGATGATCGTGACGGCGTCGCAGCTGGCGACGTACGATCAGG
TGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGACTGGGGACG
CACGTGACGGCGAGTTTTGCGGCGGGGCTTGTGGCGTCGGTGGCGTCGAA
TCCGGTGGACGTGATTATGACGAGGGTCATGAATATGAAGGTTGTGGCGG
GGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGCTGAAGACAGTG
AGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCCAACCATTTC
GAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAGAGCAAGTGA
GGAAGCTGCTCAAAGAGTTTTGATTATTTTAGGACGATGATGAATGATGA
TGCAAATTTAATGTTATTATTGTAACTTTTAGCAGTTGTTTTGGTTAGTG
AATGATTTTTTCATTGTTTTGTCACTGAGCTGCAAGGAAGCGGCACAAGC
AAACCTTGGATTTCTTAGCAACTACATAAAACGCGTAAACGAATCTTTTA
T
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