CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1706 contig Csv1_Contig1706:1..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJ16_ARATH (Chaperone protein dnaJ 16 OS=Arabidopsis thaliana GN=ATJ16 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.618e-82
Identity = 156/220 (70.91%), Postives = 174/220 (79.09%), Query Frame = 3
Query:  237 MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLFDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALXGDCXXXXXXXXXXMYF 896
            MP  RSKSE+ DA KQLRRDPYEVLGV RN TDQEIKSAYRK+ALKYHPDK ANDPVAAD+FKEVTFSYNILSDP+KRRQ+D+AGFEAV              GAVNT+FAALFSKLGVPIKT+VSAT+LEEALNG V+V PL+  Q +++KVEKQCAHFY+VTI+EEE  AG VCRV+SS KSKFKLLYFD+E   GLSLAL  D           MYF
Sbjct:    1 MPGHRSKSEKKDADKQLRRDPYEVLGVLRNSTDQEIKSAYRKLALKYHPDKTANDPVAADMFKEVTFSYNILSDPEKRRQFDSAGFEAVEAESQELELDLSSLGAVNTVFAALFSKLGVPIKTSVSATILEEALNGRVSVDPLVLGQAVSKKVEKQCAHFYAVTISEEEVSAGLVCRVESSSKSKFKLLYFDQEANSGLSLALQEDSKRTGKITSAGMYF 220          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJ39_ARATH (Chaperone protein dnaJ 39 OS=Arabidopsis thaliana GN=ATJ39 PE=2 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 1.126e-67
Identity = 134/223 (60.09%), Postives = 160/223 (71.75%), Query Frame = 3
Query:  237 MPAQRSKSERTDAGKQ---LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLFDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALXGDCXXXXXXXXXXMYF 896
            M    S+SE  DAG++    RR+PYEVLG+  N TDQEIKSAYR+MAL+YHPDKN +DPVAA++FKEVTF+Y +LSDP+ RR YDT G EAV              GAVNT+FAALF+KLGV IKTTVSA +L EALNG VT  PL+  Q ++RKVEKQ AHFYSVT+TEEEA+ G +C+V SS K+KFKLLYFD+   GGLSLAL  D           +YF
Sbjct:    1 MATHSSRSENKDAGEEDELRRRNPYEVLGIPSNSTDQEIKSAYRRMALRYHPDKNPDDPVAAEMFKEVTFAYEVLSDPENRRLYDTTGSEAVGPENEDLELDLSSLGAVNTIFAALFNKLGVQIKTTVSANLLGEALNGTVTTLPLMVGQVVSRKVEKQSAHFYSVTLTEEEAQDGLICKVHSSAKNKFKLLYFDQVENGGLSLALQEDSRKTGKLSTAGLYF 223          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJ15_ARATH (Chaperone protein dnaJ 15 OS=Arabidopsis thaliana GN=ATJ15 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.829e-65
Identity = 126/203 (62.07%), Postives = 151/203 (74.38%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLFDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALXGDCXXXXXXXXXXMYF 896
            RRDPYEVL VS++  DQEIKSAYRK+ALKYHPDKNAN+P A+++FKEV FSY+ILSDP+KRR YD AGFEA+              G VNTMFAALFSKLGVPIKTTVSA VLEEA+NG VTVRPL     ++ KVEKQCAHF+ VTI+E++A +G V RV S+ +SKFKLLYF+++ +GG  LAL  +           MYF
Sbjct:   15 RRDPYEVLCVSKDANDQEIKSAYRKLALKYHPDKNANNPDASELFKEVAFSYSILSDPEKRRHYDNAGFEALDADGMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTVSANVLEEAMNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTISEQQAESGVVVRVTSTAQSKFKLLYFEQDSSGGYGLALQEEREKTGKVTSAGMYF 217          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.153e-18
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            ++RD YE+LGV+RN T +EIK AYRK+A KYHPD N +DP AA+ FKE+  +Y +LSDP+KR +YD  G   V
Sbjct:    1 MKRDYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARYDQFGHAGV 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PORGI (Chaperone protein dnaJ OS=Porphyromonas gingivalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.180e-18
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            +RD YEVLGVS+N TD E+K AYRK A++YHPDKN  D  A + FKEV  +Y++LSDP KR QYD  G
Sbjct:    4 KRDYYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPQKRSQYDQFG 71          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PORG3 (Chaperone protein dnaJ OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.395e-17
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            +RD YEVLGVS+N TD E+K AYRK A++YHPDKN  D  A + FKEV  +Y++LSDP+KR +YD  G
Sbjct:    4 KRDYYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPEKRSRYDQFG 71          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSL (Chaperone protein dnaJ OS=Geobacter sulfurreducens GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.822e-17
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV +N +D EIK A+RK+A++YHPDKN +D  A + FKE+T +Y +LSDP KR QYD  G   V
Sbjct:    5 KRDYYEVLGVHKNASDTEIKKAFRKLAIQYHPDKNPDDKEAEEKFKEITEAYEVLSDPQKRAQYDQFGHAGV 76          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYWF (Chaperone protein dnaJ OS=Psychrobacter sp. (strain PRwf-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.380e-17
Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 590
            +RD YEVLGV R+  ++EIK AYRK+A+KYHPD+N++DP A + FKE + +Y +LSD +KR  YD  G  A               G    +F  +F   G
Sbjct:    3 KRDFYEVLGVDRSADEREIKKAYRKLAMKYHPDRNSDDPDAEEKFKEASMAYEVLSDKEKRSAYDRMGHAAFENGMGGGGFGGAGAGNFQDIFGDIFGNFG 103          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_SYMTH (Chaperone protein dnaJ OS=Symbiobacterium thermophilum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.302e-17
Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YE+LGV RN T+ EIK A+R +A KYHPD N +DP AA+ FKE+  +Y +LSDP+KR +YD  G  A
Sbjct:    6 KRDYYEILGVPRNATEAEIKKAFRNLARKYHPDANKDDPDAAEKFKEINEAYQVLSDPEKRARYDQFGHAA 76          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.302e-17
Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            ++RD YEVLGVSR+    EIK AYRK+ALKYHPDKN ++  A D FKEV  +Y +LS+ DKRR+YD  G   V
Sbjct:    1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJ16_ARATH1.618e-8270.91Chaperone protein dnaJ 16 OS=Arabidopsis thaliana ... [more]
DNJ39_ARATH1.126e-6760.09Chaperone protein dnaJ 39 OS=Arabidopsis thaliana ... [more]
DNJ15_ARATH6.829e-6562.07Chaperone protein dnaJ 15 OS=Arabidopsis thaliana ... [more]
DNAJ_CARHZ2.153e-1857.53Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
DNAJ_PORGI8.180e-1861.76Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_PORG31.395e-1760.29Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_GEOSL1.822e-1756.94Chaperone protein dnaJ OS=Geobacter sulfurreducens... [more]
DNAJ_PSYWF2.380e-1742.57Chaperone protein dnaJ OS=Psychrobacter sp. (strai... [more]
DNAJ_SYMTH5.302e-1756.34Chaperone protein dnaJ OS=Symbiobacterium thermoph... [more]
DNAJ_PELLD5.302e-1758.90Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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