CK934575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_FRASC (UDP-N-acetylmuramate--L-alanine ligase OS=Frankia sp. (strain CcI3) GN=murC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.441e-25 Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 KSTT++ML VL+A G D TA++GA V Q G+ G G FVLE+DEY G F GL PS+AV+TN++WEH D+F DE +V++ F F +++R GG LV+CGD Sbjct: 123 KSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDVFVLESDEYGGAFAGLDPSIAVITNVEWEHPDVFPDEASVRTAFAAFARRVRPGGRLVVCGD 224 HSP 2 Score: 20.7866 bits (42), Expect = 1.441e-25 Identity = 8/21 (38.10%), Postives = 11/21 (52.38%), Query Frame = 2 Query: 725 HDYKIITYGFSSFNDWYAESV 787 +D +I YGF + W A V Sbjct: 247 NDVAVIDYGFGAERHWRAVDV 267
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_FRAAA (UDP-N-acetylmuramate--L-alanine ligase OS=Frankia alni (strain ACN14a) GN=murC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 KSTT++ML VL+A G D TA++GA V Q G+ G G FVLE+DEY G F GL P++AV+TN++WEH DIF DE +V++ F F +++R GG LV+CGD Sbjct: 123 KSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDLFVLESDEYGGAFAGLEPTIAVITNVEWEHPDIFPDEASVRTAFTAFARRVRPGGRLVVCGD 224
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_ROSCS (UDP-N-acetylmuramate--L-alanine ligase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=murC PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.466e-15 Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDR*AQSRCTVLAGSNKTRYWIE 672 K+TT +++A +L G ++G P + + V+EADEYD FL L+P +A++TN++WEHVDI+ D ++ FR F +Q+ L++CGD R V+ + +Y IE Sbjct: 111 KTTTTALIALMLTRAGIAPGFLIGGETPDLGVNARWGNPAAPLVVEADEYDRTFLALTPDIAIITNVEWEHVDIYPSPDEYEAAFRTFARQVAHPQRLIVCGDNAGARR--VVGHPDAQQYGIE 232
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_MYXXD (UDP-N-acetylmuramate--L-alanine ligase OS=Myxococcus xanthus (strain DK 1622) GN=murC PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15 Identity = 54/145 (37.24%), Postives = 76/145 (52.41%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDR--------*AQSRCTVLAGSNKTRYWIEVFWWSGF*SKFRS 711 K+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L PS+A+VTN+D EH+D + D D ++S F F ++ G V+C D + R S+ Y +E GF ++F + Sbjct: 126 KTTTTSMVATVLSAAGLDPTAVVGGKVNVL-DSNAKLGKSELMVVEADESDGSFLHLHPSIAIVTNIDPEHMDHYGDLDTLQSAFVEFCNRVPFYGLNVLCLDNPNVQALLPRIEKRFVTYGSSHMADYRLENIQLDGFTTRFNA 269
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_DESAA (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=murC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.720e-14 Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S++A VL A G D T ++G + + G G+ V EADE DG FL +SPS+AVVTN+D EH+D ++D D +K F +F+ +I G V+C D Sbjct: 116 KTTTTSIVADVLAAGGLDPTVVIGGKLLSIGSNAKL-GHGEFIVAEADESDGSFLKMSPSIAVVTNIDREHMDHYKDMDEIKDAFAQFVDKIPFYGLSVLCLD 217
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_THETN (UDP-N-acetylmuramate--L-alanine ligase OS=Thermoanaerobacter tengcongensis GN=murC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.203e-14 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT S+++ +L G D T +VG + G++ G + FV EA EY FL P +AV+ N+D +H+D F++ D +K FR+F + G +V C D Sbjct: 120 KTTTTSLISVILDRAGYDPTVLVGGEIDAI-GGNVRVGKSEYFVTEACEYTDSFLKFYPYIAVILNVDSDHLDYFKNIDNIKQSFRQFASLVPSDGFVVACKD 221 HSP 2 Score: 28.4906 bits (62), Expect = 2.203e-14 Identity = 11/40 (27.50%), Postives = 24/40 (60.00%), Query Frame = 2 Query: 719 QGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 838 +G + I+TYG + +DW A+ + + +G + + + RG+ Sbjct: 230 KGLEKNIVTYGINEKSDWQAKDITYDEKGCASFNVYYRGK 269
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_MYCS2 (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium smegmatis GN=murC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.246e-14 Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SML L+ G D + VG + + + +G G FV EADE DG L +P+VAVVTN++ +H+D F E A ++F F+++I GG LV+C D Sbjct: 126 KTTTTSMLIVALQHSGFDPSFAVGGELGEAGTNA-HHGSGTTFVAEADESDGSLLEYTPNVAVVTNIEADHLDFFGSEQAYTAVFDSFVERIAPGGALVVCTD 227
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_CORJK (UDP-N-acetylmuramate--L-alanine ligase OS=Corynebacterium jeikeium (strain K411) GN=murC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.246e-14 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K++T SM L+A G D + +G + + + G G+ FV EADE DG FL SP +AVVTN++ +H+D F+ E A + +F +F +I GG LV+C D Sbjct: 126 KTSTTSMAVAALQAAGQDPSFAIGGQLNRAGTNA-HNGTGEVFVAEADESDGSFLSYSPEIAVVTNIEPDHLDYFKTESAYREVFEKFAHRIVPGGFLVVCLD 227
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_SOLUE (UDP-N-acetylmuramate--L-alanine ligase OS=Solibacter usitatus (strain Ellin6076) GN=murC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14 Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT SM A +L G D T +VG V + G V+E+DE DG FL L+P +AVVTN+D EH+D + D DA+++ F F+ ++ G +++C D Sbjct: 127 KTTTTSMAATILNYAGLDPTVVVGGRVGTMGGSNARVGHSDFLVVESDESDGSFLKLAPIIAVVTNVDREHLDHYPDLDAIRAAFLEFVNKVPFYGAVIVCLD 229
BLAST of CK934575 vs. ExPASy Swiss-Prot
Match: MURC_ROSS1 (UDP-N-acetylmuramate--L-alanine ligase OS=Roseiflexus sp. (strain RS-1) GN=murC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14 Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 301 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD 609 K+TT +++A +L G + ++G P + + V+EADEYD FL L+P VAV+TN++W+HVDI+ D ++ FR F +++ L++CGD Sbjct: 111 KTTTTALIALMLTQAGGNPGFLIGGETPDLGIHARWGDPAAPLVVEADEYDRTFLALTPDVAVMTNVEWDHVDIYPSPDNYEAAFRLFTRRVAQPQRLIVCGD 213 The following BLAST results are available for this feature:
BLAST of CK934575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934575 ID=CK934575; Name=CK934575; organism=Citrus sinensis; type=EST; length=847bpback to top |