CK934593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934593 vs. ExPASy Swiss-Prot
Match: NDHM_VITVI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera GN=ndhM PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.012e-57 Identity = 111/150 (74.00%), Postives = 121/150 (80.67%), Query Frame = 2 Query: 185 MATTSINMASAKFSMLGWIGGKRELKKKRVISISAQQQAEVEESRSKQVKENENQAQVKQQQTPL-RPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYE 631 MA TS A KFSMLGWIGGKREL+K+R ISAQQQAEVEES+ +E E + +Q + L RPVEPQ NV+SKNMSREYGGQWLS TRHVRIYAAYIDP T EFDQTQMDKLTLILDPT EFVWT E+CNKV+AYFQELVDHYE Sbjct: 1 MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEEQEKMKQQGKQKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPTNEFVWTSETCNKVYAYFQELVDHYE 150
BLAST of CK934593 vs. ExPASy Swiss-Prot
Match: NDHM_POPJC (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii GN=ndhM PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.795e-56 Identity = 109/149 (73.15%), Postives = 123/149 (82.55%), Query Frame = 2 Query: 185 MATTSINMASAKFSMLGWIGGKRELKKKRVISISAQQQAEVEESRSKQVKENENQAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYE 631 MA +S MA AKFSMLGW+GG+RELK +RVIS+S Q+QAEV+ES+ +E E +VKQ P RPVEPQ NV+SKNM REYGGQWLS TRHVRIYAAYIDPET EFDQTQ DKLTLILDPT EFVWTDE+C KV++YFQELVDHYE Sbjct: 1 MAASSSYMACAKFSMLGWLGGRRELKMRRVISVSPQEQAEVQESQEVNAQEEE---KVKQPVQP-RPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDPTDEFVWTDETCYKVYSYFQELVDHYE 145
BLAST of CK934593 vs. ExPASy Swiss-Prot
Match: NDHM_ARATH (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana GN=ndhM PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.310e-40 Identity = 78/123 (63.41%), Postives = 99/123 (80.49%), Query Frame = 2 Query: 263 KKRVISISAQQQAEVEESRSKQVKENENQAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYE 631 +K + + +Q + +E ++ +KE ++ ++K+Q TPLRPVE Q NV+SK M ++GGQWLS TRHVRIYAAYIDPET EFDQ+QMDKLTLILDPT+EFVW DESCNKV++YFQELVDHYE Sbjct: 30 QKAFVVTNPEQDSTLEVQETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYIDPETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYE 151
BLAST of CK934593 vs. ExPASy Swiss-Prot
Match: NDHM_ORYSJ (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhM PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.693e-35 Identity = 69/114 (60.53%), Postives = 86/114 (75.44%), Query Frame = 2 Query: 290 QQQAEVEESRSKQVKENENQAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYE 631 +++A VE +E + + + ++Q P +P+ Q SKNMSREYGGQWLSC TRH+RIYAAYI+PET FDQTQMDKLTL+LDPT EFVWTDE+C KV+ FQ+LVDHYE Sbjct: 49 EEEAAVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYE 162
BLAST of CK934593 vs. ExPASy Swiss-Prot
Match: NDHM_ORYSI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica GN=ndhM PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.693e-35 Identity = 69/114 (60.53%), Postives = 86/114 (75.44%), Query Frame = 2 Query: 290 QQQAEVEESRSKQVKENENQAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYE 631 +++A VE +E + + + ++Q P +P+ Q SKNMSREYGGQWLSC TRH+RIYAAYI+PET FDQTQMDKLTL+LDPT EFVWTDE+C KV+ FQ+LVDHYE Sbjct: 49 EEEAAVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYE 162
BLAST of CK934593 vs. ExPASy Swiss-Prot
Match: NDHM_PHYPA (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Physcomitrella patens GN=ndhM PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.779e-21 Identity = 47/84 (55.95%), Postives = 61/84 (72.62%), Query Frame = 2 Query: 377 LRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHY 628 +R E + ++K +SRE GGQWLSC TRHVRIYA Y+DPET DQ+Q+DKLTL+LDP EF W +E KV+ ++ELV+ Y Sbjct: 61 VRAEEVKEVTQAKGLSRESGGQWLSCTTRHVRIYAGYVDPETQVMDQSQLDKLTLMLDPDNEFEWPEEMVEKVYDKYRELVETY 144 The following BLAST results are available for this feature:
BLAST of CK934593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934593 ID=CK934593; Name=CK934593; organism=Citrus sinensis; type=EST; length=812bpback to top |