CK935211

Overview
NameCK935211
Unique NameCK935211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3300 contig Csv1_Contig3300:136..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36
Identity = 72/114 (63.16%), Postives = 86/114 (75.44%), Query Frame = 3
Query:   99 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            A  KL   + LCM V+    A AITCGQVT SLAPCI Y+RSGG +P  CCNG+R++N  ARTT DRQTACNCLK+ AGSI  +NPNNA GLP  CGV++PYKIS ST+C+ V+
Sbjct:    5 AVTKLALVVALCMAVS---VAHAITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35
Identity = 68/114 (59.65%), Postives = 87/114 (76.32%), Query Frame = 3
Query:   99 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            A  KL   + LCM+V+ P+ AQAITCGQV+ +LAPCI Y+R GG +P  CCNG+R++N  ARTTPDRQ ACNCLK  + S+P +NPNNA  LP  CGV+IPY+IS ST+C+ V+
Sbjct:    5 AMTKLALVVALCMVVSVPI-AQAITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.420e-34
Identity = 65/114 (57.02%), Postives = 86/114 (75.44%), Query Frame = 3
Query:   99 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            A  KL   + LCM+V+ P+ AQA+TCGQV+ +LAPCI Y+R GG +P  CCNG+R++N  A+TT DRQTACNCLK  + S+P +N NNA  LP  CGV++PYKIS ST+C+ V+
Sbjct:    5 AMTKLALVVALCMVVSVPI-AQALTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.495e-33
Identity = 64/114 (56.14%), Postives = 84/114 (73.68%), Query Frame = 3
Query:   99 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            A +KL   + LCM V+    A AITC QV+ +LAPCI Y+RSGG +P  CCNG++++N  A+TTPDRQ ACNCLK+ AGS+  +NP NA  LP  CGV++PYKIS ST+C+ V+
Sbjct:    5 AVIKLALVVALCMAVS---VAHAITCSQVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32
Identity = 67/113 (59.29%), Postives = 83/113 (73.45%), Query Frame = 3
Query:  102 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            A+ ++ A V CM+V  P + +A++CGQV+ SLAPCI YL  GG +P  CC+GV+SLN+AA+TTPDRQ AC CLK A  SI  +N  NA   P  CGVSIPYKIS STDCSKV+
Sbjct:    5 AMMVLCAGVTCMVVGAPYT-EALSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32
Identity = 67/107 (62.62%), Postives = 80/107 (74.77%), Query Frame = 3
Query:  123 LVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            LV+CM+V  P++  AI+CG VT  L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNCLK AAGSI  LN NNA  LP  CGV+IPYKIS ST+C+ V+
Sbjct:    4 LVMCMVVIAPMAEGAISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32
Identity = 67/107 (62.62%), Postives = 79/107 (73.83%), Query Frame = 3
Query:  123 LVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            LV+CM+V  P++  AI+CG VT  L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNCLK AAGSI  LN NNA  LP  CGV IPYKIS ST+C+ V+
Sbjct:   12 LVMCMVVIAPMAEGAISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 68/117 (58.12%), Postives = 84/117 (71.79%), Query Frame = 3
Query:   96 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            MA L  ++ LVL CM+V GP+++ A ++CG V+G +APCI YL   GP+P  CC GV +LN  ARTTPDRQ AC CL  AA S P LN   A GLP+ACGV+IPYKIS ST+C+ VR
Sbjct:    1 MAGLMKLACLVLACMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31
Identity = 69/117 (58.97%), Postives = 83/117 (70.94%), Query Frame = 3
Query:   96 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            MA L  +S LVL CM+V GP++  A ++CG V+G+LA CI YL   GP+P  CC GV +LN  ARTTPDRQ AC CL  AA S P LN   A GLP+ACGV+IPYKIS ST+C+ VR
Sbjct:    1 MAGLVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117          
BLAST of CK935211 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 3
Query:  123 LVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKHAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 440
            LV+CM+V  P++  AI+CG VT  L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNCLK AAGSI  LN NNA  LP  CGV+IPYKIS +T+C+ V+
Sbjct:   12 LVICMVVIAPMAEGAISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117          
The following BLAST results are available for this feature:
BLAST of CK935211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP_MALDO1.980e-3663.16Non-specific lipid-transfer protein OS=Malus domes... [more]
NLTP1_PRUDU1.283e-3559.65Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP_PRUAV2.420e-3457.02Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP_PYRCO3.495e-3356.14Non-specific lipid-transfer protein OS=Pyrus commu... [more]
NLTP_HELAN1.734e-3259.29Non-specific lipid-transfer protein OS=Helianthus ... [more]
NLTP4_LENCU5.046e-3262.62Non-specific lipid-transfer protein 4 (Fragment) O... [more]
NLTP6_LENCU6.591e-3262.62Non-specific lipid-transfer protein 6 OS=Lens culi... [more]
NLTP2_BRANA8.608e-3258.12Non-specific lipid-transfer protein 2 OS=Brassica ... [more]
NLTPB_BRAOT1.124e-3158.97Non-specific lipid-transfer protein B OS=Brassica ... [more]
NLTP2_LENCU1.124e-3161.68Non-specific lipid-transfer protein 2 OS=Lens culi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935211 ID=CK935211; Name=CK935211; organism=Citrus sinensis; type=EST; length=700bp
GCGGGGACTCAACTCAAGCTTCTGAACACNNNTAGCCATAAACAAAGGCA
AAAAAAAAAAGAAAAAGAAAAAGAAAATCTCAGGAGAAATCTCAAATGGC
TGCCCTCAAGCTTGTTTCAGCTTTGGTTCTGTGCATGTTGGTGACTGGTC
CCCTGAGTGCTCAGGCCATAACATGTGGGCAGGTGACTGGCTCATTGGCA
CCATGCATCGTTTACTTGAGATCGGGCGGCCCTATACCTGTGCCATGCTG
CAACGGCGTCAGGTCTCTCAACGCTGCCGCCAGAACCACACCTGACCGCC
AAACTGCATGCAACTGCTTGAAGCATGCCGCCGGATCAATCCCTAACCTC
AACCCTAATAATGCTGTTGGTCTTCCACGAGCTTGTGGAGTCAGCATTCC
TTACAAGATCAGCATCTCCACTGACTGCTCTAAGGTCCGGTGAACAGGAA
TCTGGGCTGTTGATTTTCATATTTAAGTTGACGGAGTAGAATAAATGTAT
AATAATAAGGACATTTTTGTGTCCGAATTATGAGTCTCTCTCTACACTTT
GTACTGCGAGTCTCGTTCCCGCCCTCGTTTCATGTTGTGTCTTATTGTCT
TTGCTTTTCATGTCATCGTCAGTTTGTGTCTATTCTGTTTATTAAATGAA
ATCTTGCCTTGTGTTCATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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