CK935243

Overview
NameCK935243
Unique NameCK935243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9501 contig Csv1_Contig9501:40..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC2_MOUSE (MOSC domain-containing protein 2, mitochondrial OS=Mus musculus GN=Mosc2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.945e-32
Identity = 91/279 (32.62%), Postives = 138/279 (49.46%), Query Frame = 2
Query:    2 GTIEQRKT-VRATEKNGAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAE---GAEASNWFTNYLGKPS-RLVRYNAESETRPV-----DPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR 793
            GT+  R+T  R   +      V  +++YPIKSC+G+SV +    T  G R     DR WMV+  +G   T R EP+L LV   L N            +++ + APGM+ + + +  P   ++ +      G  +     G E + WFTNYL   + RLV+++   + R          Y    ++ + DC P  L+S+ SL  LN  LK+ + +  FRPNI+V GCE F ED W  + I +   + V  C RC + T++ DTG+    EP ETL+  R
Sbjct:   36 GTVAWRRTRPRRRRQLQQVGTVSKVWIYPIKSCKGVSVCE-TECTDMGLRCGKVRDRFWMVVKEDGHMVTARQEPRLVLVSITLEN------------NYLTLEAPGMEQIVLPIKLPS--SNKIHNCRLFGLDIKGRDCGDEVAQWFTNYLKTQAYRLVQFDTSMKGRTTKKLYPSESYLQNYEVAYPDCSPVHLISEASLVDLNTRLKKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR 299          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC2_RAT (MOSC domain-containing protein 2, mitochondrial OS=Rattus norvegicus GN=Mosc2 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.553e-31
Identity = 92/282 (32.62%), Postives = 138/282 (48.94%), Query Frame = 2
Query:    2 GTIEQRKT-VRATEKNGAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQ--ALKISLSKPRDIAD----GVSVWEWCGSALAEGAEASNWFTNYLGKPS-RLVRYNAESETRPV-----DPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR 793
            GT+  R+   R   +      V  +++YPIKSC+G+SV +    T  G R     DR WMV+  +G   T R EP+L LV   L N            +++++ APGM+   L I L     I D    G+ +          G E + WFT+YL   + RLV+++ + + R          Y    ++ + DC P  L+S+ SL  LN  L++ + +  FRPNI+V GCE F ED W  + I +   + V  C RC + T++ DTG+    EP ETL+  R
Sbjct:   36 GTVAWRRARPRRRRQLQQVGTVSKVWIYPIKSCKGVSVCE-TECTDMGLRCGKVRDRFWMVVKEDGHMITARQEPRLVLVTITLEN------------NYLMLEAPGMEPIVLPIKLPSSNKIHDCRLFGLDI-----KGRDCGDEVARWFTSYLKTQAYRLVQFDTKMKGRTTKKLYPSESYLQNYEVAYPDCSPIHLISEASLVDLNTRLQKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR 299          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC2_BOVIN (MOSC domain-containing protein 2, mitochondrial OS=Bos taurus GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.473e-31
Identity = 90/260 (34.62%), Postives = 132/260 (50.77%), Query Frame = 2
Query:   62 VKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKI-----SLSKPRDI-ADGVSVW-EWCGSALAEGAEASNWFTNYLGKPS-RLVRYNAESETRP---VDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR 793
            V  +++YPIKSC+G+SV   A  T  G R     DR W+VI  +G   T R EP+L LV     ++             +++RAPGM  L +     S +K  D    G+ +    CG       EA+ WFT++L   + RLV++    + R    + P      ++ + DC P M+LS+ SL  LN  +++ + IN FRPNI+V GC  F ED W  + I N   + +  C RC + T++ DTGV    EP ETL+  R
Sbjct:   57 VSELWIYPIKSCKGVSVDA-AECTALGLRSGHLRDRFWLVIKEDGHMVTGRQEPQLVLVSITYEDDC------------LILRAPGMDQLVLPTKLLSSNKLHDCRVFGLDIQGRDCGD------EAAQWFTSFLKTDAFRLVQFEKNMKARASNEIFPSLDKNYQVAYPDCSPVMILSEASLADLNTRMEKKVKINNFRPNIVVTGCSAFEEDTWDELLIGNVEMKKILACPRCIMTTVDPDTGVIDRKEPLETLKSYR 297          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC1_HUMAN (MOSC domain-containing protein 1, mitochondrial OS=Homo sapiens GN=MOSC1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29
Identity = 85/255 (33.33%), Postives = 127/255 (49.80%), Query Frame = 2
Query:   62 VKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGAEASNWFTNYL-GKPSRLVRYNAESETRPVDPKYAAG-----EKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIR 793
            V  +++YP+KSC+G+ VS+ A  T  G R     DR W+VIN  G   T R EP+L L+      +        T    + I+ P   A+        +I         CG A A+      W T++L  +P RLV +  E   RP  P   A      ++I +SD  PF++LS+ SL  LN  L++ +    FRPNI++ GC+ ++ED W  + I +   + V  C RC + T++ DTGV +  EP ETL+  R
Sbjct:   58 VAQLWIYPVKSCKGVPVSE-AECTAMGLRSGNLRDRFWLVINQEGNMVTARQEPRLVLISLTCDGDTLTLSAAYTKDLLLPIKTPTTNAVHKCRVHGLEIEG-----RDCGEATAQ------WITSFLKSQPYRLVHF--EPHMRPRRPHQIADLFRPKDQIAYSDTSPFLILSEASLADLNSRLEKKVKATNFRPNIVISGCDVYAEDSWDELLIGDVELKRVMACSRCILTTVDPDTGVMSRKEPLETLKSYR 298          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC1_XENLA (MOSC domain-containing protein 1, mitochondrial OS=Xenopus laevis GN=mosc1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.400e-28
Identity = 81/264 (30.68%), Postives = 129/264 (48.86%), Query Frame = 2
Query:   62 VKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRD--IADGVSVWEWCGSALAEGAEASNWFTNYL--GKPSRLVRYNAE----SETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIR-SDKVLR 811
            V  + +YP+KSCR + V Q+A  +  G +     DR W+V+   G   T R EP++ L+                    + +  P MQ ++I L  P+   + D   V+         G +AS W   Y    +P RLV + A+     +++  +  +   + I + D  P MLLS+ S++ALN  L++P+ +  FRP I+  GCE F+ED W  +R+     + V  C RC + T+N ++GV    EP +TLR  R SD  L+
Sbjct:   60 VSQLLIYPVKSCRAVPV-QEAECSALGLKSGHLEDRHWLVVTEEGNMVTARQEPRMVLISATFCGNT------------LCLNGPEMQEVQIPLPLPKSNRVLD-CRVFGQDIQGRDSGEQASEWLATYFQSSQPYRLVHFEADVMRPRQSKKKEKLFRDKDVIAYPDASPIMLLSETSMEALNSRLEQPVSLANFRPCIVASGCEAFAEDDWDDVRLGATRLKRVMACGRCVLTTVNPNSGVITRKEPLDTLRTFRQSDSSLK 309          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC1_MOUSE (MOSC domain-containing protein 1, mitochondrial OS=Mus musculus GN=Mosc1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.506e-28
Identity = 84/274 (30.66%), Postives = 133/274 (48.54%), Query Frame = 2
Query:    2 GTIEQRKT-VRATEKNGAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGAEASNWFTNYLGKPS-RLVRYNAE---SETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR 793
            GT+  R+   R   +      V  +++YPIKSC+G+SVS+ A  T  G R+    DR W+VIN  G   T R EP+L L+     ++        T    + I  P    L         +   V   E  G     G +A+ W +++L   S RLV +        +R +   +   +++ +SD  PF++LS+ SL+ LN  L+  +    FRPNI++ GC  ++ED W  + I +   + V  C RC + T++ DTG++   EP ETL+  R
Sbjct:   40 GTVAWRRARPRRRRRLQQVGTVAQLWIYPIKSCKGLSVSE-AECTAMGLRYGHLRDRFWLVINEEGNMVTARQEPRLVLISLTCEDDTLTLSAAYTKDLLLPITPPATNPL---------LQCRVHGLEIQGRDC--GEDAAQWVSSFLKMQSCRLVHFEPHMRPRSSRQMKAVFRTKDQVAYSDASPFLVLSEASLEDLNSRLERRVKATNFRPNIVISGCGVYAEDSWNEVLIGDVELKRVMACTRCLLTTVDPDTGISDRKEPLETLKSYR 301          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOCOS_DANRE (Molybdenum cofactor sulfurase OS=Danio rerio GN=mocos PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 80/283 (28.27%), Postives = 135/283 (47.70%), Query Frame = 2
Query:   38 EKNGAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIAD-GVSVWEWCGSALAE---GAEASNWFTNYLGKPSRLVRYNAESETRPVDPKYAAGEKIMFSDCYP----------FMLLSQGSLDALNKLLKEPIP-------------INRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAGPEPSETLRQIRSDKV 805
            +K+G++  + ++F++P+KSC    V++  PL P G  +DR WMV+N NG   +Q+ EPKL L++  +   A          + + ++  G +A+ + L    + +D   S  + CG  +     G E S W + +LGKP RL+R           P++    K    DC P          F+L+++ S+  L + +                  + RFR N+++   EPF+ED W  + I N  FQ +  C RC++  ++Q T     EP  +L + RS KV
Sbjct:  533 KKDGSSCTLTNLFIFPVKSCASFEVTEW-PLGPQGLLYDRLWMVVNENGVCLSQKREPKLCLIQPVVCLAA----------NTLKLQISGSEAITVPLDPSLEKSDLRTSQSKVCGDRVQTVDCGEEVSAWLSEFLGKPCRLIRQR---------PEFLRDMKFGQGDCCPTPLSLVNEAQFLLINRASVCFLQEAIANRYNSDNEETWRDTEQLVQRFRANLVISAQEPFAEDNWSHLTIGNTQFQVIGKCGRCQMIGVDQKTATRTQEPLRSLSECRSGKV 795          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC2_HUMAN (MOSC domain-containing protein 2, mitochondrial OS=Homo sapiens GN=MOSC2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.849e-26
Identity = 81/275 (29.45%), Postives = 133/275 (48.36%), Query Frame = 2
Query:    2 GTIEQRKT-VRATEKNGAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPR-DIADGVSVWEWCGSALAEGAEASNWFTNYLGKPS-RLVRYNAESE---TRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR 793
            GT+  R+   R   +      V  +++YP+KSC+G+ VS+ A  T  G R     DR W+VI  +G   T R EP+L L+     N              ++ RAP M  L +   +P  +      ++         G EA+ WFTN+L   + RLV++    +   +R + P      ++ + D  P ++++  SL  LN  +++ + +  FRPNI+V GC+ F ED W  + I +   + V  C RC + T++ DTGV    +P +TL+  R
Sbjct:   36 GTVAWRRAWPRRRRRLQQVGTVAKLWIYPVKSCKGVPVSE-AECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLVLISIIYENNC------------LIFRAPDMDQLVLPSKQPSSNKLHNCRIFGLDIKGRDCGNEAAKWFTNFLKTEAYRLVQFETNMKGRTSRKLLPTLDQNFQVAYPDYCPLLIMTDASLVDLNTRMEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKVMACPRCILTTVDPDTGVIDRKQPLDTLKSYR 297          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC2_MACFA (MOSC domain-containing protein 2, mitochondrial OS=Macaca fascicularis GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26
Identity = 80/265 (30.19%), Postives = 131/265 (49.43%), Query Frame = 2
Query:   29 RATEKNGAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPR-DIADGVSVWEWCGSALAEGAEASNWFTNYLG-KPSRLVRYNAESE---TRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR 793
            R  ++ G  AK   +++YP+KSC+G+ VS+ A  T  G R     DR  +VI  +G   T R EP+L LV     N              ++ +AP M  L +   +P  +      ++         G EA+ WFTN+L  +  RLV++    +   +R + P      ++ + DC P ++++  SL  LN  +++ + +  FRPNI+V GC+ F ED W  + I +   + +  C RC + T++ DTGV    EP +TL+  R
Sbjct:   49 RRLQQVGTVAK---LWIYPVKSCKGVPVSE-AECTAMGLRSGNLRDRFLLVIKEDGHIVTARQEPRLVLVSITYENNC------------LIFKAPDMDQLVLPSKQPSSNKLHNCRIFGLDIKGRDCGNEAAQWFTNFLKTEVYRLVQFETNMKGRTSRKLLPTLDQNYQVAYPDCSPLLIMTDASLVDLNTRIEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKIMACPRCILTTVDPDTGVIDRKEPLDTLKSYR 297          
BLAST of CK935243 vs. ExPASy Swiss-Prot
Match: MOSC1_DANRE (MOSC domain-containing protein 1, mitochondrial OS=Danio rerio GN=mosc1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26
Identity = 84/268 (31.34%), Postives = 130/268 (48.51%), Query Frame = 2
Query:   20 KTVRATEKNGAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDIADGVSVWEWCGSALAEGAEASNWFTNYL--GKPSRLVRYNAESET-RP--VDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIR 793
            K +R  EK      V  + V+P+KS + +SV + A     G ++    DR W+VI  +G   T R +P+L LV          EG        + +  P M+ LK  L+   D+     V+         G + S W T +L   KP RLV Y  + +  RP   +P +   +++ + D  P ML+++ S+  LN  L + + + +FRP+I+V  CE F+ED W  IRI     + V  C RC   T++ +TGV +  EP ETL+  R
Sbjct:   36 KYMRREEKLTRVGVVTKLLVHPLKSGKAVSV-EAAECLRMGLKYGELRDRHWLVITEDGHMVTGRQQPRLVLVSLTC------EG------GHVSLNGPQMEELKFPLNNSSDLVVDCRVFSVDVQGRDCGDKVSEWLTRFLEADKPVRLVHYEPDLKPQRPHEKEPLFPKDDEVAYPDAAPVMLMTEASVGDLNSRLDKDLSVFQFRPSIVVSDCEAFTEDTWDHIRIGEVELKRVIGCGRCLFTTVDPETGVFSRKEPLETLKTYR 290          
The following BLAST results are available for this feature:
BLAST of CK935243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
MOSC2_MOUSE2.945e-3232.62MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_RAT5.553e-3132.62MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_BOVIN9.473e-3134.62MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_HUMAN8.866e-2933.33MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_XENLA4.400e-2830.68MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_MOUSE7.506e-2830.66MOSC domain-containing protein 1, mitochondrial OS... [more]
MOCOS_DANRE1.672e-2728.27Molybdenum cofactor sulfurase OS=Danio rerio GN=mo... [more]
MOSC2_HUMAN1.849e-2629.45MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_MACFA3.153e-2630.19MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_DANRE3.153e-2631.34MOSC domain-containing protein 1, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_C07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935243 ID=CK935243; Name=CK935243; organism=Citrus sinensis; type=EST; length=816bp
GGGGACGATCGAGCAAAGGAAAACAGTGAGAGCTACTGAGAAAAATGGGG
CTGCAGCCAAAGTAAAATCAATATTTGTATACCCAATTAAATCATGCAGA
GGCATCTCTGTCTCTCAGCAGGCACCCCTCACTCCTACTGGATTTCGATG
GGATAGACAGTGGATGGTAATTAATAACAACGGGAGAGCATATACTCAGA
GAAACGAGCCGAAGCTTGCTCTGGTTGAGACAGAGTTGCCAAATGAGGCA
TTTTTAGAAGGATGGGAACCCACTGGGAGATCATTCATGGTAATAAGAGC
TCCAGGGATGCAGGCTCTTAAAATTTCACTGAGCAAACCCCGTGATATAG
CAGACGGTGTTTCCGTATGGGAGTGGTGTGGCTCTGCACTGGCTGAGGGA
GCTGAAGCTTCAAATTGGTTTACAAATTACCTTGGGAAACCTAGTCGGCT
AGTTCGTTACAATGCAGAATCAGAAACTAGACCTGTCGATCCCAAATATG
CTGCTGGAGAGAAAATAATGTTTTCTGATTGTTATCCATTTATGCTGTTG
TCTCAGGGATCTTTGGATGCACTTAATAAGCTTCTCAAGGAGCCTATTCC
AATTAACCGTTTTCGACCAAACATCCTTGTTGATGGTTGTGAACCGTTTT
CTGAGGACTTATGGATGGGCATCCGAATAAACAATTGCACATTTCAAGGT
GTTAAGCTGTGTGACCGCTGTAAGGTGCCAACTATCAATCAAGACACTGG
TGTTGCTGGTCCCGAACCAAGTGAAACACTAAGGCAAATTAGGTCAGATA
AAGTTTTGCGTCCAAA
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