CK935334

Overview
NameCK935334
Unique NameCK935334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1798 contig Csv1_Contig1798:1..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.179e-42
Identity = 86/198 (43.43%), Postives = 131/198 (66.16%), Query Frame = 1
Query:  229 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALV--LXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHP 816
            ++V LLG   SPFV RV++AL+ KGV +Y+++EE++ NKS  LL+ NPV+KKVPVF+H E+ + ESL+I+EYIDETW+ NP+LP DPYQRA+ARFW+K+ ++ +  A    V  +               L+ +E E K K    F  GE   G +++A  +I +W+P+++E    Q+   +KFP++ +WS +F+NHP
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGV-EYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKK---FFGGE-EFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHP 198          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.404e-36
Identity = 85/193 (44.04%), Postives = 116/193 (60.10%), Query Frame = 1
Query:  232 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVN 810
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NPVYKKVPV IH  K + ES+IILEYIDET+E   +LP+DPY RA+ARFWAK+ ++ +A                       L+ ++ E K K    F  G+   G+ ++A   + +WL V+EE     ++  +KFP  ++W  +++N
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGV-KYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKK---FFAGD-KFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYIN 190          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.905e-36
Identity = 82/193 (42.49%), Postives = 116/193 (60.10%), Query Frame = 1
Query:  232 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVN 810
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NP++KKVPV IH  K + ES++ILEYIDET+E   +LP+DPY RA+ARFWAK+ ++ +       +                L+ ++ E K K    F  G+   G+ ++A   + +WL V+EEA    ++  +KFP   +W  +++N
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGV-KYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKK---FFVGD-KFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYIN 190          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.916e-35
Identity = 82/193 (42.49%), Postives = 114/193 (59.07%), Query Frame = 1
Query:  232 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVN 810
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NPV+KKVPV IH  K + ES++ILEYIDET+E   +LP+DPY RA+ARFW+K+  + +A                       L+ ++ E K K    F  G+   G+ ++A   + +WL V+EE     ++  +KFP  + W  +++N
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGV-KYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKK---FFVGD-KFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYIN 190          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.025e-32
Identity = 82/192 (42.71%), Postives = 114/192 (59.38%), Query Frame = 1
Query:  229 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAK-YSEELMAKAFMALVLXXXXXXXXXXXXXXGL-EKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWL--PVWEEAGSFQVLDPQKFPVITEW 792
            +EV LLG WASPF  RV++AL+ KG+  YEY+EE + NKSP LL LNP++KKVPV +H  K + ES +ILEYIDETW QNP+LP+DPY+R+ ARF+AK   E++M   F+++                 L   +E E  GK       G   +G+L+   G ++ +     WE  G  +V+  +KFP    W
Sbjct:    5 EEVKLLGIWASPFSRRVEMALKLKGI-PYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYF----GGKTVGFLDFVAGSLIPFCLERGWEGIG-LEVITEEKFPEFKRW 190          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.346e-31
Identity = 75/191 (39.27%), Postives = 106/191 (55.50%), Query Frame = 1
Query:  232 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKF 804
            EV LLG   SPF  RV+ AL+ KGV  YE+IEED+ NKSP LL+ NP++KK+PV IH  K + ES++ILEYIDE +E   +LP+DPY RA+ARFWAKY E+  A  + +                  L+ ++ EFK K   +        G+ ++       +L + EE     +   +KFP    W  ++
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGV-KYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFV----GDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEY 188          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.363e-29
Identity = 71/203 (34.98%), Postives = 112/203 (55.17%), Query Frame = 1
Query:  232 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWE-----QNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVL---XXXXXXXXXXXXXXGLEKIEGEF----KGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKF 804
            E+ LLG W+SP+  RV+V L  K +  YEY+EE++ +KS  LL  NPV+K VPV +H  + VNES +I++YIDE W      +  ++P DPY+RA+ARFWA Y ++ +  A++A++                   LE +EG F    KGK       G   +G++++  G  L W    ++    +++DP + P +  W  +F
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSL-PYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFF----GGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERF 203          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.405e-27
Identity = 68/194 (35.05%), Postives = 110/194 (56.70%), Query Frame = 1
Query:  223 MAKEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETW-EQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAE---GESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEW 792
            M+ EV LL  WAS +  R ++AL +KGV  YEY EE++ N+SP LL++NP++KK+PV IH  K + ES II++YIDE W +++PL+P DPY+R+ ARFW  Y ++ +   +  + L              G +++   FK     L  +   G+   G+++L       W   +E  G+F++   ++ P +  W
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGV-RYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWL------SKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAW 185          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.445e-26
Identity = 70/192 (36.46%), Postives = 105/192 (54.69%), Query Frame = 1
Query:  226 AKEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETW-EQNPLLPRDPYQRAMARFWAKY-SEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWS 795
            +  V LL FW S F  R+++AL  KG+  YE  EE++ +KSP LLE+NPV+KK+P+ IH  K + ESL ILEYIDE W ++ PLLP DPY+R+ ARFWA Y  +++ +                       L+ +EGE   K+      G  N+G++++A      W   +E   +F +    + P +  W+
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGI-KYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYF----GGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWA 187          
BLAST of CK935334 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.023e-25
Identity = 71/194 (36.60%), Postives = 103/194 (53.09%), Query Frame = 1
Query:  229 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNP--LLPRDPYQRAMARFWAKYSEELMAKAFMAL-VLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTK 801
            +EV LL FW S F  R+++AL +K +  YEY EED+ NKSP LL++NP++KK+PV IH  K + ES+I +EYI+E W+     LLP DPY RA ARFWA Y ++ +      L                  L+ +EG    K    +  GES  G++++A      W   +E  G+F      + P    W+ +
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEI-KYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKP---YFGGES-FGFVDIALIGYYSWFYAYETFGNFST--EAECPKFVAWAKR 190          
The following BLAST results are available for this feature:
BLAST of CK935334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GSTX6_SOYBN3.179e-4243.43Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX2_TOBAC3.404e-3644.04Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC9.905e-3642.49Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC4.916e-3542.49Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_ARATH1.025e-3242.71Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_SOLTU7.346e-3139.27Probable glutathione S-transferase OS=Solanum tube... [more]
GSTU6_ORYSJ2.363e-2934.98Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX3_SOYBN8.405e-2735.05Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC2.445e-2636.46Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX4_TOBAC6.023e-2536.60Probable glutathione S-transferase OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_H03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935334 ID=CK935334; Name=CK935334; organism=Citrus sinensis; type=EST; length=820bp
GCGGGGAAATTAAGGTCAAACTTGGCGTCTCNNNGTTACCTTGTAATTAA
GTTGAAGGCTCGAAGCTTTTAAAGTCAACCAGTCAACCTGTGCTTAACCA
ATTTATAAAAAAGGGGGTTTAATTATTACACACAGAATATCATCTCATCA
TCACCACCACAAGAAATAAATCATCTCATCACAAAGCATTACAGAGATCA
ATTAACTATCAGCGAAAATAATATGGCCAAAGAAGTGACGCTTTTGGGGT
TTTGGGCAAGTCCATTTGTGTTCAGGGTAAAAGTCGCTCTGCAGCAGAAG
GGTGTTGTTGATTATGAATACATTGAAGAAGACATCTTTAACAAGAGCCC
CAGGCTCTTGGAACTGAACCCAGTTTATAAGAAGGTTCCTGTGTTCATCC
ATGGCGAGAAAGTGGTCAATGAATCGTTGATTATTCTTGAGTACATCGAT
GAGACATGGGAGCAAAATCCTTTGTTGCCTCGAGACCCTTACCAAAGAGC
CATGGCTCGTTTCTGGGCTAAGTATTCAGAAGAACTGATGGCGAAAGCAT
TTATGGCTCTGGTTTTGAAAGGAGAGGCAAAGGAGAAAAATGCGAAAGAA
TTTGCAGAAGGATTGGAGAAGATAGAAGGGGAATTCAAGGGAAAGAGCGG
CTTATTGTTTGCTGAAGGAGAGAGCAATATTGGGTATTTGGAACTTGCAT
TTGGTTGGATTCTTTACTGGCTGCCTGTTTGGGAAGAAGCTGGATCCTTT
CAAGTTCTTGACCCTCAGAAATTTCCAGTCATCACTGAATGGAGCACCAA
GTTTGTGAATCACCCTCTCA
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