CK935349

Overview
NameCK935349
Unique NameCK935349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1030 contig Csv1_Contig1030:349..1047. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_VITVI (Histone H3.3 OS=Vitis vinifera PE=2 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_TOBAC (Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_PINPS (Histone H3.3 OS=Pinus pinaster PE=2 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3 PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_ORYCO (Histone H3.3 OS=Oryza coarctata PE=2 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_MEDSA (Histone H3.3 OS=Medicago sativa PE=1 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_LOLTE (Histone H3.3 OS=Lolium temulentum PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of CK935349 vs. ExPASy Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 2.760e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 
Query:   58 MARTKQTARKSTGGRAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 465
            MARTKQTARKSTGG+APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of CK935349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
H33_VITVI2.760e-7099.26Histone H3.3 OS=Vitis vinifera PE=2 SV=3[more]
H33_TOBAC2.760e-7099.26Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1[more]
H33_PINPS2.760e-7099.26Histone H3.3 OS=Pinus pinaster PE=2 SV=3[more]
H33_ORYSJ2.760e-7099.26Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3... [more]
H33_ORYSI2.760e-7099.26Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_... [more]
H33_ORYCO2.760e-7099.26Histone H3.3 OS=Oryza coarctata PE=2 SV=3[more]
H33_MEDSA2.760e-7099.26Histone H3.3 OS=Medicago sativa PE=1 SV=2[more]
H33_LOLTE2.760e-7099.26Histone H3.3 OS=Lolium temulentum PE=2 SV=2[more]
H33_LOLMU2.760e-7099.26Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=... [more]
H33_GOSHI2.760e-7099.26Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935349 ID=CK935349; Name=CK935349; organism=Citrus sinensis; type=EST; length=699bp
GGGGAAAGCAAATTTTTAGAGAGAGAAATTGAGTGGAAGAGTTGAAGAAA
CTCAGAGATGGCCCGTACCAAGCAAACTGCACGTAAGTCAACCGGAGGAA
GGGCTCCTAGGAAGCAACTTGCTACCAAGGCCGCCCGTAAGTCTGCGCCC
ACCACCGGTGGTGTTAAGAAGCCTCATCGTTACCGTCCTGGAACCGTCGC
CCTTCGAGAAATTCGCAAGTACCAGAAGAGTACCGAGCTGCTTATCAGGA
AACTCCCATTCCAGAGACTTGTTCGTGAAATTGCTCAGGACTTTAAGACT
GATCTGCGTTTCCAGAGCCATGCAGTACTGGCCCTGCAGGAGGCAGCGGA
GGCTTACCTTGTTGGTCTCTTCGAGGACACTAACCTCTGCGCCATTCATG
CAAAGCGTGTCACTATTATGCCCAAGGACATACAGCTTGCCCGTAGGATC
CGTGGCGAGCGTGCTTAAGTGTAATTGCTGCTTGCTTCAATTGAATGACT
GGAAGGGAAGGGGGAAGTTGTAATGTGTTAATTTGTACGTGGGGGTTGGT
GGGGGTAGATAGGGGTAGGATTCCAGTAGTTATTAGAATATGGCTTTTGT
CATCATCTGGGTTTGTTTTTGGTGGTGTTTTATAATGTCTATTTGTTGAT
GATGGGGATTTTAATTCGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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