CK935364

Overview
NameCK935364
Unique NameCK935364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2387 contig Csv1_Contig2387:28..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR_SOYBN (Pyrroline-5-carboxylate reductase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 6.763e-90
Identity = 167/240 (69.58%), Postives = 194/240 (80.83%), Query Frame = 3
Query:   87 MDAFPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            M+ FPIPAES+ LGFIGAGKMAESIA+G  +SGVLPP RI TAVH NL RR AFES GV VL  N+                       ++ PLL++ KLLVSVAAG KLKDLQEW G+ RFIRVMPNTP+AVG+AA+VMSLGG+ATEEDG +I +LFGS+GKIW+A+EK FDAITGLSGSGPAY++LAIEALADGGVAAGLPR+L+L LASQTVLGAASMV+++G+HPGQLKDDV SPG
Sbjct:    1 MEIFPIPAESYTLGFIGAGKMAESIARGAVRSGVLPPSRIRTAVHFNLARRGAFESFGVTVLPSNDDVVRESDVVVLSVKPQLVKDVVSKLTPLLTKHKLLVSVAAGTKLKDLQEWAGNDRFIRVMPNTPAAVGQAASVMSLGGSATEEDGNIIAQLFGSIGKIWKAEEKYFDAITGLSGSGPAYVYLAIEALADGGVAAGLPRDLSLSLASQTVLGAASMVSQTGKHPGQLKDDVTSPG 240          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR_ACTCH (Pyrroline-5-carboxylate reductase OS=Actinidia chinensis PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.478e-89
Identity = 170/236 (72.03%), Postives = 191/236 (80.93%), Query Frame = 3
Query:   99 PIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            PIP +++ LGFIGAGKMAESIA+GV KSGVLP  RI TA H    RR+AFES GVKVL  N+                      +Q+RPLLS K+LLVS+ AGVKLK+L++W GHSRFIRVMPNTP+AVGEAA+VMSLG TAT EDGELI KLFG++GKIW+ADEKLFDA+TGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMV + G+HPGQLKDDVAS G
Sbjct:    8 PIPTDTYKLGFIGAGKMAESIARGVVKSGVLPASRIRTA-HLGSARREAFESFGVKVLDRNDQVVEDSDVIIFSVKPQIVKEVVLQLRPLLSEKQLLVSIVAGVKLKELEDWAGHSRFIRVMPNTPAAVGEAASVMSLGATATGEDGELITKLFGAIGKIWKADEKLFDAVTGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVARGGKHPGQLKDDVASAG 242          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR1_ARATH (Pyrroline-5-carboxylate reductase OS=Arabidopsis thaliana GN=PROC1 PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 3.711e-88
Identity = 166/240 (69.17%), Postives = 190/240 (79.17%), Query Frame = 3
Query:   87 MDAFPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            M+  PIPAESF +GFIGAGKMAESIA+GV  SGVLPP+RICTAVHSNL RRD FES GV V S +                        +++  LS+ K+LVSVAAG+KL DLQEW+G  RFIRVMPNTP+AVGEAA+VMSLG  ATEEDG ++  LFG+VGKI +ADEK+FDA+TGLSGSGPAYIFLAIEALADGGVAAGLPRELAL LASQTVLGAA+MV+K+G+HPG LKDDV SPG
Sbjct:    1 MEILPIPAESFKVGFIGAGKMAESIARGVVASGVLPPNRICTAVHSNLNRRDVFESFGVNVFSTSEEVVKESDVVIFSVKPQVVKKAVTELKSKLSKNKILVSVAAGIKLNDLQEWSGQDRFIRVMPNTPAAVGEAASVMSLGTGATEEDGAIVAMLFGAVGKILKADEKMFDAVTGLSGSGPAYIFLAIEALADGGVAAGLPRELALSLASQTVLGAATMVSKTGKHPGVLKDDVTSPG 240          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR_PEA (Pyrroline-5-carboxylate reductase OS=Pisum sativum GN=PROC PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.847e-88
Identity = 167/240 (69.58%), Postives = 192/240 (80.00%), Query Frame = 3
Query:   87 MDAFPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            M+  PI ++S+ LGFIGAGKMAESIAKG ++SGVLP  RI TA HSN  RR AFESIG+ VLS N+                      ++++PLL++ KLLVSVAAG+KLKDLQEW GH RFIRVMPNTP+AVG+AA+VMSLGG ATEED  LI +LFGS+GKIW+AD+K FDAITGLSGSGPAYI+LAIEALADGGVAAGLPR+LAL LASQTVLGAASM T SG+HPGQLKDDV SPG
Sbjct:    1 MEILPILSDSYTLGFIGAGKMAESIAKGASRSGVLPSSRIVTA-HSNPSRRAAFESIGITVLSSNDDVVRASNVVVFSVKPQLVKDVVLKLKPLLTKDKLLVSVAAGIKLKDLQEWAGHERFIRVMPNTPAAVGQAASVMSLGGAATEEDANLISQLFGSIGKIWKADDKFFDAITGLSGSGPAYIYLAIEALADGGVAAGLPRDLALSLASQTVLGAASMATLSGKHPGQLKDDVTSPG 239          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR1_PONAB (Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Pongo abelii GN=PYCR1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.186e-39
Identity = 99/233 (42.49%), Postives = 132/233 (56.65%), Query Frame = 3
Query:  123 LGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            +GFIGAG++A ++AKG   +GVL   +I  ++   +L    A   +GVK+   N                        +I   +  + ++VS AAGV +    K L  +    R IR M NTP  V E ATV + G  A  EDG L+ +L  SVG     +E L DA+TGLSGSGPAY F A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HPGQLKD+V+SPG
Sbjct:    3 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPG 235          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR1_HUMAN (Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Homo sapiens GN=PYCR1 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 3.186e-39
Identity = 99/233 (42.49%), Postives = 132/233 (56.65%), Query Frame = 3
Query:  123 LGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            +GFIGAG++A ++AKG   +GVL   +I  ++   +L    A   +GVK+   N                        +I   +  + ++VS AAGV +    K L  +    R IR M NTP  V E ATV + G  A  EDG L+ +L  SVG     +E L DA+TGLSGSGPAY F A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HPGQLKD+V+SPG
Sbjct:    3 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPG 235          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR2_HUMAN (Pyrroline-5-carboxylate reductase 2 OS=Homo sapiens GN=PYCR2 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.065e-38
Identity = 95/233 (40.77%), Postives = 131/233 (56.22%), Query Frame = 3
Query:  123 LGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            +GFIGAG++A ++A+G   +G+L   +I  ++   NL    A   +GV +   N                        +I   +  + ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG+L+ +L  SVG     +E L DA+TGLSGSGPAY F+A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HP QLKD+V SPG
Sbjct:    3 VGFIGAGQLAYALARGFTAAGILSAHKIIASSPEMNLPTVSALRKMGVNLTRSNKETVKHSDVLFLAVKPHIIPFILDEIGADVQARHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVQEGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAIQLGAQALLGAAKMLLDSEQHPCQLKDNVCSPG 235          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR2_BOVIN (Pyrroline-5-carboxylate reductase 2 OS=Bos taurus GN=PYCR2 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.065e-38
Identity = 95/233 (40.77%), Postives = 132/233 (56.65%), Query Frame = 3
Query:  123 LGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            +GFIGAG++A ++A+G   +G+L   +I  ++   +L    A   +GV +   N                        +I   +  + ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG+L+ +L  SVG     +E L DA+TGLSGSGPAY F+A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HPGQLKD+V SPG
Sbjct:    3 VGFIGAGQLACALARGFTAAGILSAHKIIASSPEMDLPTVSALRKMGVNLTRSNKETVRHSDVLFLAVKPHIIPFILDEIGADVQARHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVLVREGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQHPGQLKDNVCSPG 235          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR_METAC (Pyrroline-5-carboxylate reductase OS=Methanosarcina acetivorans GN=proC PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.697e-38
Identity = 90/228 (39.47%), Postives = 134/228 (58.77%), Query Frame = 3
Query:  123 LGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQE-WTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASP 803
            +GFIGAGKM  ++ +G  K+G++ P+ I  +       +D    +G++V +DN                         ++  ++ +KL++S+AAGV L   ++     +R +RVMPN  + V EAA+ ++ G  AT ED +   ++F +VG   +  E L DA+TGLSGSGPA+IF  IEA+ADG V  G+ R+ AL LA+QTVLGAA M  ++G HPG+LKD V SP
Sbjct:    6 IGFIGAGKMGSALMQGTIKAGIVTPENIGASDVYEPFLKDLQAKLGIRVSTDNAVIVRESDILILAVKPQTLSSVLSNLKNEITSEKLVISIAAGVPLSTYEDALLEGTRVVRVMPNIAATVSEAASGIAPGKNATPEDLKAALEIFSAVGTAVQVPESLMDAVTGLSGSGPAFIFPVIEAMADGAVLEGMDRKSALTLAAQTVLGAAKMALETGMHPGELKDMVTSP 233          
BLAST of CK935364 vs. ExPASy Swiss-Prot
Match: P5CR2_RAT (Pyrroline-5-carboxylate reductase 2 OS=Rattus norvegicus GN=Pycr2 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.697e-38
Identity = 96/233 (41.20%), Postives = 132/233 (56.65%), Query Frame = 3
Query:  123 LGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGEHPGQLKDDVASPG 806
            +GFIGAG++A ++A+G   +GVL   +I  ++   +L    A   +GV +   N                        +I   +  + ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG+L+ +L  SVG     +E L DAITGLSGSGPAY F+A++ALADGGV  G+PR LA+ L +Q +LGAA M+  S +HPGQLKD+V SPG
Sbjct:    3 VGFIGAGQLACALARGFTAAGVLSAHKIIASSPEMDLPTVSALRKMGVNLTRSNKDTVRHSDVLFLAVKPHIIPFILDEIGADVQERHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVREGATVYATGTHALVEDGKLLEQLMSSVGFCTEVEEDLIDAITGLSGSGPAYAFMALDALADGGVKMGVPRRLAVRLGAQALLGAAKMLLDSEDHPGQLKDNVCSPG 235          
The following BLAST results are available for this feature:
BLAST of CK935364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
P5CR_SOYBN6.763e-9069.58Pyrroline-5-carboxylate reductase OS=Glycine max P... [more]
P5CR_ACTCH7.478e-8972.03Pyrroline-5-carboxylate reductase OS=Actinidia chi... [more]
P5CR1_ARATH3.711e-8869.17Pyrroline-5-carboxylate reductase OS=Arabidopsis t... [more]
P5CR_PEA4.847e-8869.58Pyrroline-5-carboxylate reductase OS=Pisum sativum... [more]
P5CR1_PONAB3.186e-3942.49Pyrroline-5-carboxylate reductase 1, mitochondrial... [more]
P5CR1_HUMAN3.186e-3942.49Pyrroline-5-carboxylate reductase 1, mitochondrial... [more]
P5CR2_HUMAN2.065e-3840.77Pyrroline-5-carboxylate reductase 2 OS=Homo sapien... [more]
P5CR2_BOVIN2.065e-3840.77Pyrroline-5-carboxylate reductase 2 OS=Bos taurus ... [more]
P5CR_METAC2.697e-3839.47Pyrroline-5-carboxylate reductase OS=Methanosarcin... [more]
P5CR2_RAT2.697e-3841.20Pyrroline-5-carboxylate reductase 2 OS=Rattus norv... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004562_E10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935364 ID=CK935364; Name=CK935364; organism=Citrus sinensis; type=EST; length=807bp
GGGGAATTTACTCAGTTCTACACTCAGACGTAAGTGGAGATATTAGGGGG
AAAAAAATTGTTCAGAACAGCGACGACGAGGCGATCATGGACGCATTTCC
TATTCCTGCCGAAAGCTTCATTCTAGGCTTCATCGGAGCCGGCAAAATGG
CGGAGAGCATTGCCAAAGGAGTGGCGAAATCGGGCGTGTTGCCGCCCGAT
CGTATCTGCACCGCCGTCCACTCTAATCTCAAACGCCGTGATGCTTTTGA
GTCCATCGGCGTCAAAGTATTATCCGACAATAACGCCGTTGTTGAATACA
GCGATGTGGTTGTTTTCTCTGTGAAACCGCAAGTAGTTAAAGATGTGGCC
ATGCAGATAAGGCCGCTGTTATCACGGAAGAAGCTTTTGGTTTCTGTTGC
TGCAGGAGTGAAATTGAAAGACCTTCAGGAATGGACTGGTCACAGCCGGT
TTATTAGAGTTATGCCTAATACACCTTCTGCTGTAGGTGAGGCTGCAACA
GTTATGAGCTTGGGAGGAACTGCAACTGAAGAGGATGGGGAACTAATCGG
TAAATTATTCGGATCAGTTGGCAAGATATGGCGAGCTGATGAGAAATTGT
TTGATGCAATCACGGGCCTGAGTGGCAGCGGTCCAGCATATATATTTTTA
GCAATTGAAGCTTTGGCTGATGGAGGTGTAGCTGCAGGGCTACCGCGAGA
ACTTGCACTTGGTCTAGCTTCTCAGACAGTATTAGGAGCAGCATCAATGG
TCACTAAAAGTGGGGAGCATCCTGGACAGCTAAAAGATGATGTTGCATCG
CCTGGTG
back to top