CK935369

Overview
NameCK935369
Unique NameCK935369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1807 contig Csv1_Contig1807:1..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: U424_DICDI (UPF0424 protein OS=Dictyostelium discoideum GN=DDB_G0277951 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.278e-37
Identity = 78/183 (42.62%), Postives = 117/183 (63.93%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHKTKSESGGGLSH 717
            L +++D   ++ LNE V GSV+ +FK+WE R +   +H   +  D EL++ IPF    +IKSI I+GG  G+SP+KM+ +IN   IDF +       QEW+L E+ +G + Y T+ +KF ++ ++TL+FP NFG  TT+I++I LKG  T  KR++V T VYE +P   DH  KS+   G+SH
Sbjct:   22 LNRYLDTGTITCLNEKVKGSVRHIFKSWEDRHDL--KHFVESCDDEELIINIPFGAVTQIKSIIIIGGDGGSSPNKMKAYINNSNIDFGNINSFACTQEWNLHEDFEGQIGYSTKPTKFNNINHLTLYFPSNFGSPTTKIYFIALKGVYTSAKREIVNT-VYESKPQLQDH--KSDIFNGVSH 199          
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: CA128_HUMAN (UPF0424 protein C1orf128 OS=Homo sapiens GN=C1orf128 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.756e-32
Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHK 684
            LY  IDL ++  LNE+  GS + VFK WE+R + S + +ES D D ELL  IPFT +VK+K I I+G  D + PS+MR++ N   + F D +  +  Q + L  +L G LEY T+ S+F +V ++++H   NFG DTT++ YIGL+GE T+L+R  V    YE   NP+DH+
Sbjct:   31 LYLRIDLERLQCLNESREGSGRGVFKPWEERTDRS-KFVES-DADEELLFNIPFTGNVKLKGIIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPDQTFSLNRDLTGELEYATKISRFSNVYHLSIHISKNFGADTTKVFYIGLRGEWTELRRHEVTICNYEASANPADHR 199          
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: CA128_MOUSE (UPF0424 protein C1orf128 homolog OS=Mus musculus GN=Trp26 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.701e-32
Identity = 75/172 (43.60%), Postives = 110/172 (63.95%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHK 684
            LY  IDL ++  LNE+  GS + VFK WE+R + S + +ES D D ELL  IPFT +VK+K + I+G  D + PS+MR++ N   + F D +  +  Q + L  ++ G LEY T+ S+F +V ++++H   NFG DTT+I YIGL+GE T+L+R  V    YE   NP+DH+
Sbjct:   31 LYLRIDLERLQCLNESREGSGRGVFKPWEERTDRS-KFVES-DADEELLFNIPFTGNVKLKGVIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPEQTFSLNRDITGELEYATKISRFSNVYHLSIHISKNFGADTTKIFYIGLRGEWTELRRHEVTICNYEASANPADHR 199          
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: U424_DROPS (UPF0424 protein GA19395 OS=Drosophila pseudoobscura pseudoobscura GN=GA19395 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.139e-32
Identity = 76/180 (42.22%), Postives = 107/180 (59.44%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHKTKSESGGG 708
            LY  ID   +  LNE   GS KTVFK +E R + S      +D D ELL  IPFT ++K+K I I G  D + P+K+++F NR  + F DA+ ++  QE++L  + +G +EY  +   F SV ++TL+FP NFG D T+I+YIGL+GE ++     V    YE R N +DHK K   G G
Sbjct:   31 LYTKIDAENLECLNEETEGSGKTVFKPYESRQDMS--KFVQSDADEELLFNIPFTGNIKLKGIIICGANDDSHPNKVKIFKNRPKMTFDDAK-VKVDQEFELTRDPRGEIEYSPKVVNFSSVHHLTLYFPSNFGDDKTRIYYIGLRGEFSEAHYHGVTICNYEARANAADHKDKVFDGVG 207          
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: U424_DROME (UPF0424 protein CG6153 OS=Drosophila melanogaster GN=CG6153 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.047e-31
Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHKTKSESGGG 708
            LY  IDL  V  LNE   G  K+VFK +E+R + S +++ES D D ELL  IPFT ++K+K I I G  D + P+ +++F NR  + F DA+  +  QE+ L  + +G +EY  +   F SV +++L+FP NFG D T+I+YIGL+GE T+     V    YE R N +DHK K+  G G
Sbjct:   31 LYTKIDLDNVECLNEETDGQGKSVFKPYEKRQDLS-KYVES-DADEELLFNIPFTGNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDAR-AKPDQEFQLTRDARGEIEYSPKVVTFSSVHHLSLYFPSNFGEDITRIYYIGLRGEFTEAHYHGVTICNYESRANAADHKEKAFDGVG 207          
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: CA128_XENLA (UPF0424 protein C1orf128 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.788e-31
Identity = 72/172 (41.86%), Postives = 110/172 (63.95%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHK 684
            L++ IDL K+  LNE+  GS ++VF+AWE+R N     +ES+D D ELL  IPFT +VK+K I ++G    T P+++R+F N   + F D    +A Q + L  ++ G LEY T+ ++F +V+++++H   NFG + T+I+YIGL+GE T+  R  V    YE   NP+DHK
Sbjct:   29 LFRKIDLDKLQCLNESREGSGRSVFRAWEER-NDRTRFVESDD-DEELLFNIPFTGNVKLKGIVLIGEDSDTHPAELRLFKNVPHMSFDDT-GREADQTFSLNIDVNGNLEYPTKIARFSNVSHLSIHISKNFGAENTKIYYIGLRGEWTEAHRHEVTICNYEAAANPADHK 197          
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: YOJ9_CAEEL (UPF0424 protein ZK353.9 OS=Caenorhabditis elegans GN=ZK353.9 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.802e-30
Identity = 73/174 (41.95%), Postives = 111/174 (63.79%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHKTK 690
            +  +ID+ KV+ LNE+V G+ K VFK  E+R +   E++ES D D ELL  IPFT  V++  +SI+G  DG+ P+K+R+F +RE + F D   ++A QE DL ++ QG+++Y  + SKF ++ N+++    NFG D T+I+YIGL+GE     R  +A   YE R    DHK +
Sbjct:   28 MVSYIDMEKVTTLNESVDGAGKKVFKVMEKR-DDRLEYVES-DCDHELLFNIPFTGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDCS-IEADQEIDLKQDPQGLVDYPLKASKFGNIHNLSILVDANFGEDETKIYYIGLRGEFQHEFRQRIAIATYESRAQLKDHKNE 198          
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: CA128_DANRE (UPF0424 protein C1orf128 homolog OS=Danio rerio GN=zgc:77241 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.298e-29
Identity = 70/175 (40.00%), Postives = 107/175 (61.14%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHKTKS 693
            LY+ ID+ K+  LNE+  G  K VFK W+QR + + + +ES D D ELL  IPFT  VK+K I I G  D + P+++R+F N   + F D    +  Q + L  + +  LEY T+ ++F +V ++++H   NFG ++T+++YIGL+GE T+  R  V    YE   NP+DHK +S
Sbjct:   30 LYRRIDIEKLQCLNESRDGDGKLVFKPWDQRTDRN-KFVES-DADEELLFNIPFTGSVKLKGIIISGEDDESHPAEIRLFKNIPQMSFDDTS-REPEQAFRLNRDPRAELEYPTKIARFSNVEHLSIHVSRNFGAESTRVYYIGLRGEYTEAHRHEVTICNYEAAANPADHKVES 201          
BLAST of CK935369 vs. ExPASy Swiss-Prot
Match: YN82_SCHPO (UPF0424 protein P35G2.02 OS=Schizosaccharomyces pombe GN=SPBP35G2.02 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.876e-21
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 1
Query:  169 LYKHIDLSKVSALNEAVPGSVKTVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQG--VLEYQTRYSKFQSVANITLHFPDNFGG-DTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDH 681
            LY  I    +  LNEAVP S K VFK W+ R + +   +  +D D +LL  +PF     +KSI +    + T+P    +F NR  +DF    D+QA + ++     +G  + E+  +   +Q++ N+ + F  + G  D TQI YIGL+G     K D V TI YE  P PSDH
Sbjct:   24 LYSCIRKESIVTLNEAVPDSGKLVFKPWDLRYDDTD--IVESDADDQLLFQVPFAGAATLKSILVRIFPNETAPHSFSLFPNRTDLDFDTIGDVQATETFEFPLTFEGSHIFEFPVKTRLYQNLQNLNIFFTKSDGSDDPTQIAYIGLRGSFVPFKGDPVVTI-YEATPRPSDH 194          
The following BLAST results are available for this feature:
BLAST of CK935369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
U424_DICDI8.278e-3742.62UPF0424 protein OS=Dictyostelium discoideum GN=DDB... [more]
CA128_HUMAN2.756e-3244.19UPF0424 protein C1orf128 OS=Homo sapiens GN=C1orf1... [more]
CA128_MOUSE4.701e-3243.60UPF0424 protein C1orf128 homolog OS=Mus musculus G... [more]
U424_DROPS6.139e-3242.22UPF0424 protein GA19395 OS=Drosophila pseudoobscur... [more]
U424_DROME3.047e-3142.78UPF0424 protein CG6153 OS=Drosophila melanogaster ... [more]
CA128_XENLA6.788e-3141.86UPF0424 protein C1orf128 homolog OS=Xenopus laevis... [more]
YOJ9_CAEEL9.802e-3041.95UPF0424 protein ZK353.9 OS=Caenorhabditis elegans ... [more]
CA128_DANRE8.298e-2940.00UPF0424 protein C1orf128 homolog OS=Danio rerio GN... [more]
YN82_SCHPO4.876e-2135.63UPF0424 protein P35G2.02 OS=Schizosaccharomyces po... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004562_D09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935369 ID=CK935369; Name=CK935369; organism=Citrus sinensis; type=EST; length=784bp
GGGGGTGTTCCGGGGTATTTTAGTCATATCAGATTAACTCGTGGTTGTAG
GCTGTAGCTCGCACATAGTCGTGTGTGTTGTGGCGGTAACCGGGTTTAGA
GGCGGAAGGGGATGGCGTGTTTGAACGATCATAGCTGTGAAGATCACGAT
TGCTCTTCTGATTGGTCTCTCTACAAACATATAGATCTTTCCAAGGTGTC
TGCATTAAATGAGGCTGTTCCAGGGAGTGTCAAGACAGTTTTCAAAGCAT
GGGAGCAGCGTCTGAATTCTTCTGGGGAACATTTGGAAAGCAATGATGGT
GATCCAGAGTTACTTGTTTATATTCCATTTACTACAGATGTTAAGATCAA
GAGCATTTCAATTGTTGGTGGTGCTGATGGAACAAGTCCTTCGAAGATGA
GAGTGTTCATCAATCGAGAGGGTATTGACTTCTCAGATGCTCAAGATATG
CAAGCTATTCAGGAATGGGATTTGGTTGAGAATTTGCAAGGAGTGTTAGA
ATACCAAACAAGGTATTCCAAATTTCAAAGTGTGGCCAATATCACATTAC
ACTTCCCTGACAATTTTGGTGGTGACACAACTCAGATACACTACATTGGC
CTAAAAGGGGAAGCCACCCAGTTGAAGAGGGACGTCGTGGCAACAATTGT
TTATGAGCTGAGGCCGAATCCCTCCGACCACAAAACAAAGTCTGAAAGCG
GCGGTGGTCTTTCGCATGTGGAGTGAACAATTTCATGTTCTCTATCAAGG
TTTATCACTTTTATGTACTTCCAAATTCTGATAA
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