CK935417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.550e-68 Identity = 136/210 (64.76%), Postives = 162/210 (77.14%), Query Frame = 2 Query: 149 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDG-PPMLAGSKIDVISGADLEISEMKKL 775 KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSKSTIGVEFQTRT+ I+ K +KAQIWDTAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IILIGNK DLV+ R V EDA +FAE +GLFF E SAL NV++AF +L EIY V+KK L + +G L+G KI +I G EI + + Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASLSGQKI-IIPGPAQEIPAKRNM 221
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 4.636e-68 Identity = 133/208 (63.94%), Postives = 162/208 (77.88%), Query Frame = 2 Query: 149 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDG-PPMLAGSKIDVISGADLEISEMK 769 KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWDTAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELRAHAD +I I+LIGNK+DL D RAV EDA +FA+ +GLFF E SA+ N++ AF +L EI+ V+KK L + + +G P L G KI ++ G I E K Sbjct: 11 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKI-LVPGPGQVIPEKK 217
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 3.925e-67 Identity = 134/201 (66.67%), Postives = 158/201 (78.61%), Query Frame = 2 Query: 140 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVD---GPPMLAGSKIDV 733 + KIDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQTRT+ I+ + +KAQIWDTAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+LIGNKSDL +R V EDA +FAE + LFF E SAL NV+ AF +L EIY VSKK L N +VD +L G+KI V Sbjct: 11 VGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNL-VANEEVDSSGNSSLLKGTKIVV 210
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.154e-65 Identity = 126/194 (64.95%), Postives = 151/194 (77.84%), Query Frame = 2 Query: 149 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG-NGKVDGPPMLAGSKI 727 KIDYVFKVV+IGDSAVGK+QIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWDTAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELRAHAD +I I+L GNK+DL D RAV EDA +FA+ +GLFF E SA+ ++ AF +L EI+ V+KK L N P L G KI Sbjct: 11 KIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASLTGKKI 204
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 8.469e-62 Identity = 120/217 (55.30%), Postives = 160/217 (73.73%), Query Frame = 2 Query: 140 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG-NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 787 + D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++GK++KAQIWDTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++V RW++EL+ H D +I ++L+GNKSDL + AV ED +AE + L F E SAL NV+ AF +L +IY SKK++E G +G P G KI+V + ++S +KKL CS Sbjct: 6 VEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVP---KGEKIEVKN----DVSALKKLGCCS 215
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.218e-61 Identity = 124/218 (56.88%), Postives = 156/218 (71.56%), Query Frame = 2 Query: 134 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 787 N + + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ GNKSDL +RAVS ED AE +GL F E SAL N++ AF +L EIY +SKK L + P G+ I+V + S ++ S CS Sbjct: 3 NRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQ--GTTINV-----ADASANQRRSCCS 213
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.170e-61 Identity = 122/214 (57.01%), Postives = 159/214 (74.30%), Query Frame = 2 Query: 146 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 787 D DY+FK+V+IGDS VGKS +LSRF++NEF +SKSTIGVEF TR++ ++ KI+KAQIWDTAGQERYRA+TSAYYRGA+GA+VVYDIT+ +F++V RW++ELR H D +I I+L+GNK+DL +RAVS EDA FAE + FF E SAL NV+ AF +L EIY V +K LE G+ D + G I+V G D ++S +KK+ CS Sbjct: 9 DDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGD---DPAALPKGQTINV--GKD-DVSAVKKVGCCS 216
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 9.364e-61 Identity = 116/202 (57.43%), Postives = 149/202 (73.76%), Query Frame = 2 Query: 140 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGA 745 + + Y+FK+V+IGDS VGKS ILSRFT+N F DSKSTIGVEF T+++ + GK IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQSFD+V RW+ ELR HADSSI I+++GNKSDL+ +RAVS ++ AE +GLFF E SA+ NV+ AF ++ E+YG V++K L P+ + K I A Sbjct: 5 VDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAPLPSQGKTISIDSA 206
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.597e-60 Identity = 118/213 (55.40%), Postives = 158/213 (74.18%), Query Frame = 2 Query: 146 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 784 D+ DY+FK V+IGDS VGKS +L RFT+NEF +SKSTIGVEF TR + ++ K IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+ SFD+V RW++ELR HADS+I I+L+GNK+DL+ +RAVS E+A FA + L F E SA++ NV+ AF +L EI+ VS + LE G+ DG AG +++ + ++++ K S C Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGD---DGVHPTAGQTLNIAPTMN-DLNKKKSSSQC 213
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.086e-60 Identity = 119/214 (55.61%), Postives = 157/214 (73.36%), Query Frame = 2 Query: 146 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 787 D+ DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K+IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V W++ELR H D +I ++L+GNKSDL + AV EDA FAE + L+F E SAL NV+ AF +L +I+ VSKK +E + + P G KID+ G D +S +KK CS Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPS--KGDKIDI--GKD--VSAVKKGGCCS 215 The following BLAST results are available for this feature:
BLAST of CK935417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935417 ID=CK935417; Name=CK935417; organism=Citrus sinensis; type=EST; length=850bpback to top |