CK935452

Overview
NameCK935452
Unique NameCK935452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig362 contig Csv1_Contig362:1..566. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
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BLAST of CK935452 vs. ExPASy Swiss-Prot
Match: UCR11_SOLTU (Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.013e-12
Identity = 33/51 (64.71%), Postives = 44/51 (86.27%), Query Frame = 3 
Query:  123 MLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEEK 275
            + KFL+PK R Q  D+QAAA WGVAAV+GAL++IQP+D+L+KTF+EK EE+
Sbjct:   11 LFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQPWDFLRKTFIEKQEEE 61
The following BLAST results are available for this feature:
BLAST of CK935452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UCR11_SOLTU1.013e-1264.71Ubiquinol-cytochrome c reductase complex 6.7 kDa p... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004555_E12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935452 ID=CK935452; Name=CK935452; organism=Citrus sinensis; type=EST; length=566bp
GGGGAAGGAAAAACGTTGGATTGGTGGTCATTGACATTGGCATTCGACGA
ACAAAGATTTGGTGCATTAAAAAGCTTGGTTAGGGTTTATAGATCCAAGA
AGAAATGGCAGGCGAAGCTTCGATGTTGAAGTTTCTGAAGCCGAAGTCGC
GTCTGCAACCCGTAGACGTACAGGCCGCCGCCTTCTGGGGTGTTGCTGCT
GTGTCCGGTGCTCTTTACCTCATCCAACCATTTGATTGGTTGAAGAAGAC
CTTTTTGGAGAAGTCTGAAGAAAAATAAAATTGACGTTGACGATCCGGTG
AAGCTTTTTGATGTCTGCTTTTGGGTTGTGGATGAGAAGAACATGGACAT
ATTTGTTCTGAAATAATGTAGTTTCATTTTCTACTTCATGTCCTAAGGCC
TTTTGGCATTTAACTTTTGAGAATATTTGATTTGCTCAGACCCGCAAGTT
TGTGTTAATTTTCATTGAAATTTCTTCGTGAGCATTCTCGCGCCCTTTCT
CCTTAAAAAGGAAGTGATAAAATTCTTTTTCTTTCATCAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
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