CK935471

Overview
NameCK935471
Unique NameCK935471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1821 contig Csv1_Contig1821:1..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.969e-60
Identity = 105/140 (75.00%), Postives = 119/140 (85.00%), Query Frame = 3
Query:    3 ELKPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWISTSS 422
            ++ PEKGE NAVTA GR DP+Q +GFVF NCLINGTEEYMKL+ + P+VHKN+LGRPWK+YSRTVFI CNLEAL+ PDGWLPWSGDFALKTLYYGE +NTGPGS  + RV WSSQIP EHV+ YSV NFIQ DEW S S+
Sbjct:  412 QINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSSQIPDEHVHVYSVANFIQADEWASMSA 551          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.556e-56
Identity = 93/134 (69.40%), Postives = 115/134 (85.82%), Query Frame = 3
Query:   21 GENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWISTSS 422
            G NNA+TAHGR D +Q +GFVF NC INGTEEYMK + + P  HKN+LGRPWKE+SRTVF++CNLE+L+ PDGW+PW+GDFALKTLYYGE++NTGPGS  ++RVPWSS+IP +HV+ YSV NFIQ DEW ST++
Sbjct:  469 GANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSSEIPEKHVDVYSVANFIQADEWASTTA 602          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 8.622e-32
Identity = 65/136 (47.79%), Postives = 84/136 (61.76%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWS--SQIPAEHVNAYSVQNFIQGDEWI 410
            KP   +   +TAHGR DP + +GFVFQ C I G  +Y+ +        K YLGRPWKEYSRT+ ++  +   V P GW PW GDF LKTL+Y E QNTGPGS  ANRV W+    +  E +  ++   +IQGD+WI
Sbjct:  423 KPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAV----KETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSEEDILKFTPAQYIQGDDWI 554          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 9.533e-31
Identity = 65/136 (47.79%), Postives = 82/136 (60.29%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQ--IPAEHVNAYSVQNFIQGDEWI 410
            +P KG++N VTA GRTDP Q +G     C I   ++     Y+     K YLGRPWKEYSRTV +   ++  + P GW  WSGDFAL TLYY E+ NTGPGS T NRV W     I A   + ++V NF+ G+ WI
Sbjct:  416 QPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTV----KTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVINATDASNFTVTNFLVGEGWI 547          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.245e-30
Identity = 62/134 (46.27%), Postives = 84/134 (62.69%), Query Frame = 3
Query:   30 NAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQ---IPAEHVNAYSVQNFIQGDEWISTSS 422
            N +TA GRTDP Q +G +  NC +    +   +  S     K +LGRPWK+YSRTV+I   L++L++P GW+ WSGDFAL TLYY E+ NTGPGS TANRV W           V+ ++V NFI G+ W+  ++
Sbjct:  374 NTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSV----KTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATN 503          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.124e-30
Identity = 65/139 (46.76%), Postives = 85/139 (61.15%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEH---VNAYSVQNFIQGDEWIST 416
            KP + + N  TA GR DP Q +G    NC +    + + +  S     K YLGRPWKEYSRTVF+   +E+L+ P GWL WSGDFAL TLYY E++NTGPGS T  RV W       +   V  ++V NFIQG +W+++
Sbjct:  177 KPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSS----FKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTS 311          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.774e-30
Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQ--IPAEHVNAYSVQNFIQGDEWISTS 419
            +P + + NA+TA GRTDP Q +G    NC I   ++ +   Y+     K YLGRPWKEYSRTVF+   ++ +V P GW  W+GDFAL TLYY E+ NTG GS T +RV W     I +   N ++V+NF+ GD W+  S
Sbjct:  429 QPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTV----KTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINSTDANNFTVENFLLGDGWMVQS 563          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 1.054e-29
Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWS--SQIPAEHVNAYSVQNFIQGDEWI 410
            KP KG+   VTA GR++  + +G V   C I G   Y+ +      V+K YLGRPWKE+SRT+ +   ++ ++ P GWLPWSGDFALKTLYY E  NTGPGS  A RV W    ++  +    Y+   F++GD WI
Sbjct:  426 KPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPM----KSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLTPQDALLYTGDRFLRGDTWI 557          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.923e-29
Identity = 63/144 (43.75%), Postives = 83/144 (57.64%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHV-------NAYSVQNFIQGDEWISTS 419
            KP  G+ N +TA  R +P + +GFV Q+  +    E              YLGRPW+ +SRTVF+ CNL ALV P GWLPWSG FAL TLYYGE+ NTG G+  + RV W    P  HV         ++V+NF+ G+ WI+ +
Sbjct:  420 KPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASE-------------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKW----PGYHVIKTVTEAEKFTVENFLDGNYWITAT 546          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.522e-28
Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 3
Query:   24 ENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPA---EHVNAYSVQNFIQGDEWISTS 419
            + N VTA GR+DP Q +G    NC I G+              K YLGRPWK+YSRTV +   ++  +HP GW PWS +FALKTLYYGEF N+GPGS  + RV W+   PA        ++V  FI G+ W+ ++
Sbjct:  399 DQNYVTAQGRSDPNQNTGISIHNCRITGST-------------KTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPST 520          
The following BLAST results are available for this feature:
BLAST of CK935471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
PME51_ARATH1.969e-6075.00Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME64_ARATH6.556e-5669.40Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME21_ARATH8.622e-3247.79Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME20_ARATH9.533e-3147.79Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME2_CITSI1.245e-3046.27Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME_ACTDE2.124e-3046.76Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME41_ARATH2.774e-3046.04Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME23_ARATH1.054e-2945.59Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME6_ARATH8.923e-2943.75Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME35_ARATH1.522e-2844.44Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_D05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935471 ID=CK935471; Name=CK935471; organism=Citrus sinensis; type=EST; length=820bp
GGGAATTAAAGCCGGAGAAAGGTGAGAACAATGCAGTGACTGCTCATGGC
AGAACGGACCCTGCTCAATGGTCAGGTTTCGTTTTCCAGAACTGTTTGAT
CAACGGCACCGAGGAGTACATGAAATTATATTATAGTAAGCCTCGTGTGC
ACAAGAATTACTTGGGGAGGCCATGGAAAGAGTACTCGAGAACTGTTTTT
ATTCACTGTAACTTAGAAGCTCTTGTACATCCAGACGGGTGGCTGCCTTG
GAGCGGTGATTTTGCTTTGAAAACGCTTTACTATGGTGAATTCCAAAATA
CTGGACCCGGGTCTAAGACGGCTAATAGAGTTCCGTGGAGTTCCCAAATT
CCTGCAGAGCATGTTAATGCATATTCGGTGCAGAATTTTATCCAAGGTGA
TGAATGGATTTCGACATCATCTTAATTGCTGCACGCAATAGCAGAATCTG
CTGATTTTTCTTGTACAATTTGTATACCGTGGCTTAAATGATTAAATGAT
TGGGGACTATGGAAATATTTCCCTTTACTGATTTTCTATAAACATTAGTG
TAGTATGATGTAGGCCACATATGTTGCTTGACTTGAAGGCAAAGATGCCA
ATGTGACAAGGCATTAAGTTGAGCTTGTAGCACAAAACGTAATGTCATTC
TATCTGTCAATGTACTATTTTTTCAGCTTTATGAGATGGAGAATGGAGAT
GTACAGCTTAGAGCCTTAATATGATTAAGACTCCGCAATAATGGAAATGA
GTGGTGGGGGAAGCAGCTTCTGCATTTTCTTCTCCTTAAACAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
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