CK935482

Overview
NameCK935482
Unique NameCK935482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:267..1089. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935482 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 64/206 (31.07%), Postives = 102/206 (49.51%), Query Frame = 3
Query:   84 ILALATKPQLGASES--EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLGLLPYD-NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGV-SNVDGVQRLVVAD 662
            +LA A  P L A++S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P +    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG  K      T  ++FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL ++D
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of CK935482 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12
Identity = 56/211 (26.54%), Postives = 104/211 (49.29%), Query Frame = 3
Query:   66 TTLSFLILALATKPQ---LGASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLLPYDN-STIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVG-VSNVDGVQRLVVADD 665
            T +  L+ A  +K     +  + + P+LD  G+++ +  +YY++S++ G   GGG++  +     CP  V+Q       G  +     D+   +VR ST++ ++F  +   + C+  ++W++DN + S GK ++T    K      T  ++FK+EK                 YK   C ++ + SC TLC D+G  S+ DG  RL ++D+
Sbjct:    5 TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFCPSVCD-SCTTLCSDIGRHSDDDGQIRLALSDN 200          
BLAST of CK935482 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  117 ASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKD-KRGKNLGLLPY---DNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNFFKLEKVSASIFDMKI 533
            AS   P+LD+ G++V +   YY+VSA+WG   GG   A      +C TDVI +SP D   G  + + P      ST+V  ST    +F+ +++ + C  +  W + +D+AS G+ F+  GE      N FK+E V A++   K+
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVI-VSPNDLDNGDPITITPATADPESTVVMASTYQTFRFN-IATNKLCVNNVNWGIQHDSAS-GQYFLKAGEFVSDNSNQFKIELVDANLNSYKL 177          
The following BLAST results are available for this feature:
BLAST of CK935482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MIRA_RICDU6.248e-1431.07Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC4.477e-1226.5421 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
SPOR1_IPOBA4.950e-1134.03Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCGF1004555_B04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935482 ID=CK935482; Name=CK935482; organism=Citrus sinensis; type=EST; length=823bp
GCGGGAAAAACAAACAGCAGCTATCCTCAAAANNNAAAAAAAAACAAATG
AAGACTTCATTAGTAACAACACTCTCCTTCCTTATACTTGCTTTGGCCAC
AAAACCTCAGTTGGGCGCCTCGGAATCTGAACCTATCTTAGATGTCTATG
GCAACCAGGTGGACTCCAGCCACAGGTATTATCTTGTCTCAGCACTCTGG
GGAGTTAAAACCGGCGGTGGAATTAGCGCGGACAAAGGCAAAAATGGACA
GTGTCCAACGGATGTTATCCAATTAAGTCCTAAGGACAAAAGGGGAAAGA
ATTTAGGTTTACTTCCGTATGACAATTCCACAATTGTCCGGGAATCCACT
AATATTAAATTGAAATTCTCAAGAGTTTCTTCTCTTCAGCAGTGTAACAA
AGATTCGTTGTGGAAAGTTGACAACGATAACGCTTCATTAGGAAAGCAGT
TTATAACAATCGGTGAAGGTAAAACGTGTCAAAATTTTTTTAAACTTGAG
AAAGTTAGTGCATCAATATTTGATATGAAAATAGCACTAGACATTCCCTG
TCTATACAAAATTGTTCATTGTTCAACACTTGTTAATGGTTCTTGCGATA
CACTCTGCAAAGACGTTGGCGTTTCTAATGTGGATGGCGTCCAACGTCTA
GTTGTGGCTGATGATAATGATCAGCCAAATCTGCCTTTGCCTGTCGTGTT
ATTTCCAGCTGATAGTGGAAGATCTATGTTATTTCCGTCTCTGTAATGAA
TAAGCCAACAGGCTGTATTATTCTAAATAATGGACCAGGCTAGTACTCCG
AAAAAAAAAAAAAAAAAAAAAAA
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