CK935532

Overview
NameCK935532
Unique NameCK935532
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7653 contig Csv1_Contig7653:15..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935532 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.793e-13
Identity = 78/270 (28.89%), Postives = 118/270 (43.70%), Query Frame = 2
Query:   23 MIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESYG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSIYAAYSGETLVK--VIEKPINLSDIIPTPVYVGFTAATGDFLESHEVINWTFNS 778
            + F+ L  + L   +SS       +SF+F +F  D  D   LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LS+ ++Y      +   +   ++L   +P  V VGF+ +TG ++++H +++WTFNS
Sbjct:   20 LAFITLFLMLLNRVNSS-----DSLSFTFDNFRPDQRD---LILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272          
BLAST of CK935532 vs. ExPASy Swiss-Prot
Match: LECS_SOPJA (Seed lectin OS=Sophora japonica PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.658e-11
Identity = 78/273 (28.57%), Postives = 115/273 (42.12%), Query Frame = 2
Query:    2 VALAEQKMIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESYGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIKISRH----QNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPG--DKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDVDL--KSGRAIQVRIYYNPDFGQLSIYAAYSGETLVKVIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 778
            V LA     FLLLL+   +  S+ ILS      FSFP FA +  D   L+  G   + S G L +T      +PI    GR LY  P+ +         +   S           ++ DG+ F  A   N     G G +LGL  S G    +  +AV+ DT +N                  + N +NS   V    ++G    V I Y      L++   Y       ++   ++L  I+P  V VGFTAATG    ++E+H+V++W+F S
Sbjct:   19 VVLAISITFFLLLLN---KVNSAEILS------FSFPKFASNQED---LLLQGDALVSSKGELQLTT-VENGVPIWNSTGRALYYAPVHIWDKSTGRVASFATSFSFVVKAPVASKSADGIAFFLAPPNNQIQGPG-GGHLGLFHSSGYNSSYQIIAVDFDTHINA-------WDPNTRHIGIDVNSINSTKTVTWGWQNGEVANVLISYQAATETLTVSLTYPSSQTSYILSAAVDLKSILPEWVRVGFTAATGLTTQYVETHDVLSWSFTS 270          
BLAST of CK935532 vs. ExPASy Swiss-Prot
Match: LEC2_CYTSC (2-acetamido-2-deoxy-D-galactose-binding seed lectin 2 OS=Cytisus scoparius PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.825e-11
Identity = 71/245 (28.98%), Postives = 101/245 (41.22%), Query Frame = 2
Query:   95 ISFSFPSFAKDSCDNKTLICYGAIESYGALSITPGPPPNLPIRKVGRVLYGKPLSL-------QRSFIDTTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGL---QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDVDLKSGRAIQVRIYYNPDFGQLSIYAAY-SGETLVK---VIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 778
            +SFSF  F  D   N  L     I   G L +T           +GR LY  P+ +       + SF  T  +  IS   N +  A DG+ F  A     P +   G YLGL    SS       +AVE DT  N                  +S  V+S      K+G    V I Y P    L     Y SG+T  K   +I   ++L   +P  V +GF+A TG   +++E+H++++W+F S
Sbjct:    4 LSFSFTKFKTDQ-KNLILQRDALITPTGKLQLTTVENGKPAAYSLGRALYSTPIHIWDKSTGDEASFA-TFFSFVISDAPNPSTAATDGLAFFLAPADTQPQS--AGGYLGLFEKDSSYNSSNQIVAVEFDTYYNSAWDPQTNPHIGIDVNTIKSKKVSSW---GFKNGNVATVLITYQPSSKSLVASLVYPSGQTSDKTSYIISANVDLKATVPEWVRIGFSATTGQTDNYIETHDILSWSFKS 241          
BLAST of CK935532 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 69/241 (28.63%), Postives = 102/241 (42.32%), Query Frame = 2
Query:   95 ISFSFPSFAKDSCDNKTLICYGAIESYGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIK----ISRHQNYT-DRAGDGMTFIFASDKNGPSAKGVGEYLGL--QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLD--VDLKSGRAIQVRIYYNPDFGQLSIYAAYSGETLVKVIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 778
            ISFSF  F   + DN TL     I   G L +T      +P     GR LY KP+ +  S   T  + +     S  Q YT     DG+ F     K+ P A+G G YLG+   S   + +  LAVE DT  N                  + N + S+      L +G+   V I Y+     L +   Y     +  I + +++  ++P  V VG + ATG   D  E+H+V +W+F +
Sbjct:    4 ISFSFSEFEPGN-DNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYG-YLGVFNNSKQDNSYQTLAVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQA 235          
The following BLAST results are available for this feature:
BLAST of CK935532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
LEC2_CLALU8.793e-1328.89Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
LECS_SOPJA1.658e-1128.57Seed lectin OS=Sophora japonica PE=2 SV=1[more]
LEC2_CYTSC4.825e-1128.982-acetamido-2-deoxy-D-galactose-binding seed lecti... [more]
LEC_ERYCG8.230e-1128.63Lectin OS=Erythrina crista-galli PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCGF1004554_E08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935532 ID=CK935532; Name=CK935532; organism=Citrus sinensis; type=EST; length=810bp
AGTAGCCCTCGCAGAACAAAAAATGATTTTCCTACTACTCCTCTCAGTTT
TTCTTCGCGGAGCTTCTTCATCAATCCTTTCCGAAGACACACCTATTAGC
TTCTCATTTCCCTCATTCGCCAAAGACAGTTGTGACAATAAGACCCTCAT
TTGCTACGGAGCGATTGAAAGTTACGGCGCCTTAAGCATCACACCAGGCC
CTCCACCAAACCTGCCGATCAGAAAGGTTGGACGGGTTTTATACGGCAAG
CCTCTGAGTTTACAGCGATCTTTTATTGATACCACCATCACCATTAAGAT
CTCACGCCATCAGAATTACACTGATCGTGCCGGAGATGGCATGACGTTCA
TTTTTGCAAGCGATAAAAACGGTCCATCAGCAAAGGGCGTCGGCGAATAT
CTTGGACTGCAGTCTTCACCAGGCGATAAATTTCCTCCATTAGCCGTGGA
GCTGGACACATGCCTGAACAAGAACCTGAATGATCCAGATGATAACCATA
TTGGCATCGACATAAACGGAATCGAATCAAATCCAGTTAATAGTCTGCTT
GACGTTGATCTCAAAAGTGGACGAGCAATCCAGGTTCGAATTTATTACAA
TCCAGACTTTGGACAACTCTCTATTTATGCGGCATATTCGGGGGAAACAC
TTGTGAAGGTGATTGAAAAACCCATTAACCTGTCAGATATAATTCCAACG
CCCGTCTATGTTGGATTCACAGCAGCTACGGGGGACTTTTTAGAAAGCCA
TGAGGTTATAAATTGGACCTTCAACTCGTTCCCAGTGCCGCCTTCTCTCA
AGGAGAAAAA
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