CK935535

Overview
NameCK935535
Unique NameCK935535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_ARATH (Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 1.711e-47
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRTRA 304
            N DQLVKIAKVLGTDELNAYLNKY LELDPQL+ALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA+EAMAH YFAQVRAAE+SR R+
Sbjct:  233 NQDQLVKIAKVLGTDELNAYLNKYQLELDPQLEALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAKEAMAHAYFAQVRAAETSRMRS 332          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 6.502e-47
Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRTR 301
            N DQLVKIAKVLGTDELNAYLNKY LELD QL+ALVGRHSRKPWSKFINADN+HLVSPEAID+LDKLLRYDHQDRLTA+EAMAHPYFAQVRAAESSR R
Sbjct:  233 NQDQLVKIAKVLGTDELNAYLNKYQLELDTQLEALVGRHSRKPWSKFINADNRHLVSPEAIDYLDKLLRYDHQDRLTAKEAMAHPYFAQVRAAESSRMR 331          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_MAIZE (Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.189e-46
Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRTRA 304
            NHDQLVKIAKVLGTD LN YLNKY +ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HPYF QVRAAE+SRTRA
Sbjct:  233 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAENSRTRA 332          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK23_ARATH (Probable casein kinase II subunit alpha OS=Arabidopsis thaliana GN=At2g23080 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.038e-44
Identity = 87/99 (87.88%), Postives = 93/99 (93.94%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRTR 301
            NHDQLVKIAKVLGT+EL+ YLNKY L+LDPQL+ALVGRH  KPWSKFINADNQHLVSPEAIDFLDKLL+YDHQDRLTAREAM HPYFAQV+AAESSR R
Sbjct:  233 NHDQLVKIAKVLGTNELDHYLNKYQLDLDPQLEALVGRHVPKPWSKFINADNQHLVSPEAIDFLDKLLQYDHQDRLTAREAMDHPYFAQVKAAESSRLR 331          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_DROME (Casein kinase II subunit alpha OS=Drosophila melanogaster GN=CkIIalpha PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.406e-33
Identity = 64/90 (71.11%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 274
            N+DQLV+IAKVLGT+EL AYL+KY+++LDP+   ++ RHSRK W +F+++DNQHLVSPEA+DFLDKLLRYDH DRLTAREAMAHPYF  +
Sbjct:  236 NYDQLVRIAKVLGTEELYAYLDKYNIDLDPRFHDILQRHSRKRWERFVHSDNQHLVSPEALDFLDKLLRYDHVDRLTAREAMAHPYFLPI 325          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_NEUCR (Casein kinase II subunit alpha OS=Neurospora crassa GN=cka PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.133e-33
Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRTR 301
            N DQLVKIAKVLGTDEL  YL+KY +ELD Q D ++GR  RKPW  FINA+NQ  VS EAIDFLDKLLRYDH +RLTA+EAMAHPYFA VR  E++R R
Sbjct:  231 NSDQLVKIAKVLGTDELFDYLDKYEIELDAQYDDILGRFQRKPWHSFINAENQRFVSNEAIDFLDKLLRYDHNERLTAKEAMAHPYFAPVR-DEATRAR 328          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_XENLA (Casein kinase II subunit alpha OS=Xenopus laevis GN=csnk2a1 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 6.979e-33
Identity = 67/110 (60.91%), Postives = 87/110 (79.09%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRTRA*QPASWSSYP 334
            N+DQLV+IAKVLGT++L  Y++KY++ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYF  +   + SR       S SS P
Sbjct:  238 NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQTRLTAREAMDHPYFYPI-VKDQSRMGGSNMPSGSSTP 346          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_RAT (Casein kinase II subunit alpha OS=Rattus norvegicus GN=Csnk2a1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 6.979e-33
Identity = 62/90 (68.89%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 274
            N+DQLV+IAKVLGT++L  Y++KY++ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYF  V
Sbjct:  238 NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_RABIT (Casein kinase II subunit alpha OS=Oryctolagus cuniculus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.979e-33
Identity = 62/90 (68.89%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 274
            N+DQLV+IAKVLGT++L  Y++KY++ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYF  V
Sbjct:  238 NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_HUMAN (Casein kinase II subunit alpha OS=Homo sapiens GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.979e-33
Identity = 62/90 (68.89%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 274
            N+DQLV+IAKVLGT++L  Y++KY++ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYF  V
Sbjct:  238 NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327          
The following BLAST results are available for this feature:
BLAST of CK935535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
CSK21_ARATH1.711e-4792.00Casein kinase II subunit alpha-1 OS=Arabidopsis th... [more]
CSK22_ARATH6.502e-4791.92Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
CSK2A_MAIZE7.189e-4688.00Casein kinase II subunit alpha OS=Zea mays GN=ACK2... [more]
CSK23_ARATH1.038e-4487.88Probable casein kinase II subunit alpha OS=Arabido... [more]
CSK2A_DROME1.406e-3371.11Casein kinase II subunit alpha OS=Drosophila melan... [more]
CSK2A_NEUCR3.133e-3371.72Casein kinase II subunit alpha OS=Neurospora crass... [more]
CSK21_XENLA6.979e-3360.91Casein kinase II subunit alpha OS=Xenopus laevis G... [more]
CSK21_RAT6.979e-3368.89Casein kinase II subunit alpha OS=Rattus norvegicu... [more]
CSK21_RABIT6.979e-3368.89Casein kinase II subunit alpha OS=Oryctolagus cuni... [more]
CSK21_HUMAN6.979e-3368.89Casein kinase II subunit alpha OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_E11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935535 ID=CK935535; Name=CK935535; organism=Citrus sinensis; type=EST; length=577bp
GGGCAACCATGATCAGCTTGTCAAAATTGCCAAGGTACTGGGAACTGATG
AGTTAAATGCATATCTGAACAAATATCATTTAGAGCTTGATCCTCAACTC
GATGCACTTGTTGGGAGGCACAGCCGGAAGCCATGGTCAAAATTTATTAA
TGCTGATAATCAGCATCTGGTTTCTCCAGAGGCAATCGATTTTCTTGATA
AGCTCCTCCGTTATGATCACCAGGATAGGCTAACTGCTAGGGAGGCAATG
GCCCATCCATATTTCGCACAAGTGAGGGCTGCTGAGAGTAGCAGGACCCG
CGCGTAGCAGCCTGCCTCATGGAGTTCCTATCCGAACTGAATTCCTTATC
ATTGTTCAAATGATATGTATCGTGCTTATAACTGTTTGATCAAATTGCTC
AAGTTTGTGCTTGCGTGTGTCTTTTTGTTTTCAGTTTTTACCCTTGTGCC
TGCTTCTTGAGGAAGAACTAAATGAGAAAGCAAGAATGCCATGTCCTCTT
CTTTTCTTTAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAACAAGGAGGA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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