CK935547

Overview
NameCK935547
Unique NameCK935547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7741 contig Csv1_Contig7741:35..875. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935547 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.550e-20
Identity = 72/242 (29.75%), Postives = 111/242 (45.87%), Query Frame = 3
Query:  117 IQIQRDDTTFDAYVVG-KEDAPGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSG-----LDWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 809
            ++ +++      Y+   K   PG++V+ EWWG++  + N      +    GF A  PD Y GK   +  +A  LM+      +D   A+    ASV++LK       KKVGVTG+C GG L++  +   P+ +DA V FYG+P     D    K P+     E D FV   +V            +GV  +V +Y G  HAF+N          E   D +DP   + AW+   ++   YL+
Sbjct:    5 VEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEV---IDIAKKVWKNGVDVKVKVYSGVTHAFLN----------EKREDVYDPCRAQDAWNLTVAFFKEYLT 231          
BLAST of CK935547 vs. ExPASy Swiss-Prot
Match: YGHX_ECOLI (Putative uncharacterized protein yghX OS=Escherichia coli (strain K12) GN=yghX PE=5 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.154e-17
Identity = 65/215 (30.23%), Postives = 104/215 (48.37%), Query Frame = 3
Query:  177 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGL--DTAEAQHLMSGLDWPGAVKDIHASVNWLKA--NGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 809
            P +VVV E  G++  I++ A ++++   G+ AL PD      G   +  + + L   +D    + D  A++ +++     + KVG+TG+C GG ++ A++V  PE+   V FYG   P  AD  + +AP+  HF ELD  +     +           +   YE +IYPG  H F N   D   R        +D +A +LAW R   W  +YLS
Sbjct:   82 PAVVVVHENRGLNPYIEDVARRVAKA--GYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAP-TADVAKIEAPLLLHFAELDTRIN----EGWPAYEAALKANNKVYEAYIYPGVNHGFHN---DSTPR--------YDKSAADLAWQRTLKWFDKYLS 278          
BLAST of CK935547 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.069e-16
Identity = 67/239 (28.03%), Postives = 107/239 (44.77%), Query Frame = 3
Query:  117 IQIQRDDTTFDAYVVGKEDA-PGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGL---DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYL 806
            ++ +++      Y+   + A P ++V  EWWG++  + N      +L + GF A  PD Y+G+   +  +A  LM+ +         +   ASV ++K       KKVG+TG+C GG LA+  +   PE VDA + FYG+P     +    K P+     E D FV   +V            +GV  +V ++ G  HAF+N          E   D +DP     AW    ++   YL
Sbjct:    5 VEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEV---IDIAKTVWKNGVDVQVKVFSGVTHAFLN----------EKREDVYDPKRACEAWELAVNFFKTYL 230          
BLAST of CK935547 vs. ExPASy Swiss-Prot
Match: DLHH_METEA (Putative carboxymethylenebutenolidase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p1735 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.764e-11
Identity = 72/291 (24.74%), Postives = 120/291 (41.24%), Query Frame = 3
Query:   15 TPLLKPSLARTHFPAGYRFAVRSMA-------DSEASPFKKIQIQRDDTTFDAYVVGKEDA---PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAE-----AQHLMSGLDWPGAVKDIHASVNWLKANG---SKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYG---------VPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAF-MNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRY 803
            T L + ++  T    G+  AV+ +A       D+      +++I   D    AY     +    P I+VVQE +GV   IK+   ++++L  G+ AL P+LY  +  + T          ++S +     + D+ A+V + K  G   + ++G+TG+C GG +    +   P V A V++YG         +P   +      KAPV   +G  D  +    V T          +G   +  +YP + HAF  +  P     R E   D          W R Q W  +Y
Sbjct:   15 TTLSRRTVIATSLATGFALAVQPVAAQTTIATDANGLIAGEVKIPMQDGVIPAYRAMPAEGGPFPTILVVQEIFGVHEHIKDVCRRLAKL--GYFALAPELYARQGDVSTLTNIQQIVSEVVSKVPDAQVMSDLDAAVAFAKGTGKADTARLGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLYGGADQGI---PVATIDRMKEACRAAGKTCDFVVYPEAGHAFHADYRP---SYRAEPAQD---------GWKRLQDWFRQY 288          
The following BLAST results are available for this feature:
BLAST of CK935547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
USF_AQUPY3.550e-2029.75Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
YGHX_ECOLI2.154e-1730.23Putative uncharacterized protein yghX OS=Escherich... [more]
DLHH_AQUAE1.069e-1628.03Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
DLHH_METEA8.764e-1124.74Putative carboxymethylenebutenolidase OS=Methyloba... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004554_E06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935547 ID=CK935547; Name=CK935547; organism=Citrus sinensis; type=EST; length=841bp
GGGGGAGCAGATCAACTCCGCTTCTTAAGCCCTCTCTCGCAAGGACTCAC
TTTCCCGCCGGTTATCGCTTTGCAGTCAGATCAATGGCAGACTCTGAAGC
TTCGCCCTTCAAGAAAATCCAGATTCAGAGAGATGATACTACTTTTGATG
CATATGTGGTTGGCAAAGAAGACGCCCCTGGGATTGTTGTAGTTCAGGAG
TGGTGGGGTGTTGATTTTGAGATCAAGAACCATGCTGTCAAAATCTCCCA
ACTAAACCCTGGATTCAAGGCACTTATACCAGATTTATATCGGGGAAAGG
TTGGTTTGGATACTGCTGAAGCACAGCACTTGATGAGTGGTCTTGATTGG
CCAGGTGCTGTCAAGGATATCCACGCTTCAGTTAATTGGCTTAAGGCAAA
TGGTTCCAAGAAGGTTGGCGTGACTGGATATTGCATGGGAGGTGCTCTCG
CTATTGCAAGTTCTGTCTTAGTTCCTGAGGTTGATGCTGTTGTTTCATTT
TATGGGGTTCCCCCACCTGAGCTCGCCGATCCTACCCAGGCTAAGGCACC
TGTTCAAGCTCATTTTGGGGAGCTTGACAATTTTGTTGGCTTTTCAGATG
TGAAAACTGCCAAAGCATTGGAGGAAAAGCTGAAAGCATCTGGTGTTCCA
TATGAGGTACATATTTATCCTGGCAGTGCACATGCTTTCATGAACATTTC
TCCGGATGGAGTGAAGAGGAGGAAAGAAATGGGAATGGATGATCACGATC
CAGCCGCAGTTGAGCTGGCGTGGTCTCGCTTCCAATCATGGATGACCCGC
TACTTATCTGCTTAAGTAATTCACTAGTATTATGAATCTAT
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