CK935549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.651e-27 Identity = 89/248 (35.89%), Postives = 116/248 (46.77%), Query Frame = 2 Query: 161 MPAKPD-ENRQLDRGAQSVSQSAIYSQQPWWXXXXXXXXXXXXXXXXXXREQ----PNGSVVNGA-TYSQDG-INGQEHAHLKHIPSSTPLAMGER--LEQNSQM---------------ELVGHSIVLTSYPYTDPQHVGVITPYVPQVMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQL---NDNAANSAEKG 823 M +KP EN + +V Q +Y++ PWW PNGS N + S+DG +NG+ K ++T + +E N ELVGH I PY DP + G++ Y Q + GM + R VYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH+HAMRRAR GGRF ++ D E+G Sbjct: 1 MQSKPGRENEEEVNNHHAVQQPMMYAE-PWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERG 247
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.795e-25 Identity = 65/130 (50.00%), Postives = 83/130 (63.85%), Query Frame = 2 Query: 449 ELVGHSIV-LTSYPYTDPQHVGVITPYVPQVMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEKGMNSG 835 +LVGH++ +S PY DP + GV+ Y + GM +R V+VNAKQY+ ILRRRQ+RAKAELEKK+IK+RKPYLHESRHQHAMRR RG GGRF K+ N A+ + ++G Sbjct: 113 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTEASKRKAEEKSNG 240
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24 Identity = 59/121 (48.76%), Postives = 77/121 (63.64%), Query Frame = 2 Query: 461 HSIVLTSYPYTDPQHVGVITPYV-PQVMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEK 820 +S+ YPY DP + + P P + QL G+ Q V+VNAKQY GILRRRQSRA+ E + KVIK+RKPYLHESRH HA+RR RGCGGRFLN K+ +++ +S+ + Sbjct: 51 NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHE 171
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.990e-24 Identity = 69/162 (42.59%), Postives = 86/162 (53.09%), Query Frame = 2 Query: 362 NGQEHAHLKHIPSSTPLAM-----GERLEQNS-QMELVGHSIVLTSYPYTDPQHVGVITP--YVPQVM--IPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAE 817 N + HA + S T + E ++ NS E + H + YPY DP + V Y+P + QL GM Q V+VNAKQY GILRRRQSRAK E + IKA+KPY+HESRH HA+RR RGCGGRFLN K+ N + E Sbjct: 11 NNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGL----YPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEE 168
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.874e-21 Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 2 Query: 479 SYPYTDPQHVGVITP-YVPQV-MIPPQLYGMHQARXXXXXXXXXXX-VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEK 820 S+ Y DP + G++ Y+PQ PQ+ M R V+VNAKQY I+RRRQ RAK E + K+I+ARKPYLHESRH HA++R RG GGRFLNTK+L + +A + Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAR 250
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA2_ARATH (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana GN=NFYA2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21 Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 2 Query: 470 VLTSYPYTDPQHVGVITPYVPQ--VMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAE--LEKKVI--KARKPYLHESRHQHAMRRARGCGGRFLNTKQLN-DNAANSAEKGMNS 832 + T YPY + Q+ GV++ Y Q VM+P + +YVN+KQY GI+RRRQSRAKA L++K + + RKPY+H SRH HA+RR RG GGRFLNTK N +N+ +A+KG S Sbjct: 101 IYTKYPYGEQQYYGVVSAYGSQSRVMLPLNM------------ETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGS 216
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA8_ARATH (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.072e-20 Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 479 SYPYTDPQHVGVITP--YVPQVMI-PPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDN 799 S+ Y DP H G + P Y+PQ I PQ+ + V+VNAKQ+ I+RRRQ RAK E + K+IKARKPYLHESRH HA++R RG GGRFLNTK+L ++ Sbjct: 132 SFHYADP-HFGGLMPAAYLPQATIWNPQMTRV----PLPFDLIENEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES 236
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA5_ARATH (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.875e-20 Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = 2 Query: 611 VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEKGMNSG 835 ++VNAKQY ILRRR+ RAK E + K+IK RKPYLHESRH HA++RARG GGRFLNTK+L +++ + M +G Sbjct: 180 IFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLCSSQMANG 254
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYA6_ARATH (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana GN=NFYA6 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.940e-18 Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 521 PYVPQVMIP-PQLYGMHQARXXXXXXXXXXX-VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQ 787 PY Q + PQ+ G+ +R ++VNAKQY+ ILRRR+ RAK E + K+IK RKPYLHESRH HA++R RG GGRFLNTK+ Sbjct: 141 PYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK 231
BLAST of CK935549 vs. ExPASy Swiss-Prot
Match: NFYAA_ARATH (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana GN=NFYA10 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18 Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 2 Query: 467 IVLTSYPYTDPQHVGVITPYVPQ-----VMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTK 784 ++ T +P+ + Q+ GV++ Y Q VMIP ++ +YVN+KQY GI+RRRQSRAKAE K+ + RKPY+H SRH HAMRR RG GGRFLNTK Sbjct: 95 MMYTKHPHVE-QYYGVVSAYGSQRSSGRVMIPLKMETEEDGT-----------IYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTK 190 The following BLAST results are available for this feature:
BLAST of CK935549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935549 ID=CK935549; Name=CK935549; organism=Citrus sinensis; type=EST; length=843bpback to top |