CK935556

Overview
NameCK935556
Unique NameCK935556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935556 vs. ExPASy Swiss-Prot
Match: OSS2_PEA (Organ-specific protein S2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 1
Query:  121 IDARKDLRDYWRIVVKNQDMPGESTQGLIPEDQASTVSKTTAYCHTHEDSEHTMEKPFFNKNFELMPDVSIY-DNGVKLTKQKAFVKDLELMPDVSIYDNGIKPKDKQRSFAKNFELMPDVSIY-DNGIKPTKQKAFAKHFEFLPDVSIY-DNGIKPTKQKFFAKDFELMPDVSIYD 642
            +++RKD+ +YW++V+K+QDMP E  QGL+    AS +  +           H  E       FE  P  S Y DN +   +    + + E  P+ S Y +     ++ +  +  FE  P++S Y DN I   + K     FE  P+ S Y DN I       F  DFE  P ++ Y+
Sbjct:   21 VESRKDVGEYWKLVMKDQDMP-EEIQGLL---DASNIKNS---------KTHAKENMGAIGEFEPRPYASAYGDNEIHAKENMGAIGEFEPRPNASAYGDNEIHANENKGASGEFEPRPNISAYGDNEIHANENKGAIGEFETRPNASAYGDNEIGAE----FTDDFEPRPSMTKYN 180          
The following BLAST results are available for this feature:
BLAST of CK935556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
OSS2_PEA7.538e-1129.94Organ-specific protein S2 OS=Pisum sativum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004554_C05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935556 ID=CK935556; Name=CK935556; organism=Citrus sinensis; type=EST; length=903bp
GGGGATGCAAATTACAAACGCAGTATCTAATATTGTTTGCCACTGGCCAG
AAACATGAATATCAAAGCCTTATTTGTTCTCTCCACAGTGCTCTCATTGC
TTCTCTTGTTTGCCAACATGATAGATGCGAGAAAAGACCTGAGAGATTAT
TGGAGAATTGTCGTGAAAAATCAAGACATGCCTGGGGAATCAACTCAAGG
TCTCATTCCTGAAGATCAAGCCTCGACCGTCTCTAAAACCACAGCCTATT
GCCATACACATGAAGATTCTGAGCACACCATGGAGAAGCCTTTTTTCAAT
AAGAACTTTGAGCTGATGCCTGACGTTTCAATCTATGACAACGGCGTTAA
GCTGACGAAACAAAAGGCTTTTGTCAAGGACCTCGAGCTAATGCCTGATG
TTTCGATTTATGACAACGGTATTAAACCAAAGGATAAGCAGAGATCCTTC
GCCAAGAACTTCGAGCTCATGCCTGATGTTTCAATTTACGACAACGGTAT
TAAGCCAACCAAACAAAAGGCTTTTGCCAAGCACTTCGAGTTCTTGCCTG
ATGTTTCAATTTACGACAACGGTATTAAGCCAACCAAACAAAAGTTCTTC
GCCAAGGACTTCGAGCTCATGCCTGATGTTTCTATTTATGACAATGGTGT
AAAGCTAGCCAAACAAAGGTTCTCCGCCAAGGACTTCGAACTCATGCCTG
ATGTTTCAATTTATAACAATGGTGTAGAGCTAGCCAAACAGAAGGCATTC
GCCAAAGGCTTCGAGCTCATGCCTGATGTTTCAATTTATGACAATGATAT
TAAACCATCGAAGAAGAGTTCATATGCCAAGGACTTTGAGCTGAAGGCTG
ATATTTGAATTCATGAACCGACCGAACAAAAATAGGTTATTAGCAGTACG
GAT
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