CK935565

Overview
NameCK935565
Unique NameCK935565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.541e-75
Identity = 137/159 (86.16%), Postives = 151/159 (94.97%), Query Frame = 3
Query:  453 MQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLREEGSPMSGSVSPF 929
            + SS A NWL+S GSSSGLIVKRTIRVDIPV+KYPN+NFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +E+MMRGKPGYEHLNEPLHILVEAELP+EIVDARLMQAREIL+DLL PV+E+HDFYKKQQLRE  LLNG+LREEGSPMSGS+SP+
Sbjct:  138 VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY 296          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.795e-74
Identity = 136/157 (86.62%), Postives = 146/157 (92.99%), Query Frame = 3
Query:  459 SSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLREEGSPMSGSVSPF 929
            SS   NWL+S GSSSGLI KRTIRVDIPV+ YPNFNFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +EEMMRGKPGYEHLNEPLHILVEAELP+EIVDARLMQAREIL+DLL P++E+HD YKKQQLRE  LLNGTLREEGSPMSGSVSP+
Sbjct:  146 SSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY 302          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 3.021e-55
Identity = 103/154 (66.88%), Postives = 124/154 (80.52%), Query Frame = 3
Query:  468 AQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLREEGSPMSGSVSPF 929
            A  W  +  S S   VKR +R+D+PV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +EE ++GKPGYEHLNE LHIL+EA+LP++IVD +L QA+EI+E+L+KPVDES D+ K+QQLRE  LLN  LRE     SGSVSPF
Sbjct:  118 AMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF 271          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.658e-53
Identity = 108/167 (64.67%), Postives = 128/167 (76.65%), Query Frame = 3
Query:  438 RISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLN-GTLREE--GSPMSGSVSPF 929
            R+SG        +W  + GS S   VKR +R++IPV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHLNE LHIL+EA+LP  IV+ RL QA+EI+E+LLKPVDES DF K+QQLRE  LLN   LREE  G    GSVSPF
Sbjct:  111 RLSGT--PGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPF 275          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.452e-49
Identity = 97/161 (60.25%), Postives = 123/161 (76.40%), Query Frame = 3
Query:  465 SAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLREEG-SP-----MSGSVSPF 929
            S   W+   G  +  IVK+ IR+D+PV+KYP++NFVGR+LGPRGNSLKRVE +T CRV IRGRGS+KD  +EE ++GKPGYEHL EPLH+L+EAELP +I+++RL  A   LE LLKP+DES D YK++QL+E   LNGTLREE  SP     +S S+SPF
Sbjct:  129 SPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPF 289          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIA_XENLA (Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.972e-30
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = 3
Query:  453 MQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            M SSS +   S      G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   61 MNSSSNEKRTSELPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 207          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
The following BLAST results are available for this feature:
BLAST of CK935565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
QKIL1_ARATH1.541e-7586.16KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL2_ARATH3.795e-7486.62KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKIL4_ARATH3.021e-5566.88KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIL3_ARATH1.658e-5364.67KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKIL5_ARATH1.452e-4960.25KH domain-containing protein At1g09660 OS=Arabidop... [more]
QKIA_XENLA1.972e-3044.90Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 ... [more]
QKI_RAT3.719e-2946.92Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_PIG3.719e-2946.92Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1[more]
QKI_MOUSE3.719e-2946.92Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1[more]
QKI_HUMAN3.719e-2946.92Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_B10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935565 ID=CK935565; Name=CK935565; organism=Citrus sinensis; type=EST; length=929bp
GGGGACGATAGGCAGCCACTAGTTAGATTAGCGAGTGTGTGTCTGGTCGG
GATCATCCCACCAGCTACACAAATCTGCAGACAGCCGAACGCCACCTTCG
TCATCATCAATCATCGCAATCTTCCGTCCGCCGTACGCTTCTCATCGTCG
ATCATACCGCTGAAGCCACCGTCTGGATCTGATAAAGTGACCCGACGGCG
ACGACCGTAGACACTAACAGCAGAAAACTAACTTAACGATGGCGTCATCA
GGTGGAGGGAGGTTCATGGCCTACTCGCTGTCACCTTCTGCTCCTCACTC
TCCTCACCTCCCCTCTCTCCGCTCCGCATCCTCCGCTATCCTCGATCAAG
AAAAATATCTCTCTGAGTTACTAGCTGAGCGTCATAAGCTTAATCCATTC
CTGCCTGTATTACCGAATACTTACCGGCTGTTGAACCAGGATTTCTGGTT
TAATGCAGTCATCATCAGCACAAAACTGGCTTAGCTCACAAGGTAGCTCA
TCGGGTCTTATTGTTAAGAGGACAATCAGAGTGGATATTCCAGTCGAAAA
ATATCCTAATTTCAACTTTGTCGGGCGCCTCCTTGGTCCTCGAGGCAACT
CGCTTAAGCGAGTCGAAGCTAGTACAGAATGCCGTGTTCTGATTAGGGGA
CGCGGCAGTATAAAGGATCCAGCAAGGGAAGAAATGATGAGAGGAAAACC
TGGGTATGAACATTTGAATGAGCCTCTCCATATCCTGGTTGAGGCAGAAT
TGCCAGTTGAGATAGTTGATGCTCGCCTAATGCAAGCACGTGAGATACTT
GAAGATTTGCTCAAGCCTGTGGATGAATCCCATGATTTCTACAAGAAACA
ACAACTGCGAGAGCNNNCACTGCTCAATGGTACACTTCGTGAAGAGGGTT
CTCCAATGTCTGGGTCAGTGTCCCCCTTT
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