CK935625

Overview
NameCK935625
Unique NameCK935625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6290 contig Csv1_Contig6290:381..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935625 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 2.248e-12
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 2
Query:   14 LWKVDSYDDP----LIVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGV-SSKDGVRRLALVGDDEP 259
            +W++D YD+      +  GG++G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+   + G RRLAL   D+P
Sbjct:  128 VWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL--SDKP 209          
BLAST of CK935625 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.240e-11
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 2
Query:   14 LWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIG-VSSKDGVRRLAL 241
            +W++D+YD+      + T G++G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  S  DG  RLAL
Sbjct:  121 VWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
The following BLAST results are available for this feature:
BLAST of CK935625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MIRA_RICDU2.248e-1241.38Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC4.240e-1145.6821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004553_D12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935625 ID=CK935625; Name=CK935625; organism=Citrus sinensis; type=EST; length=502bp
GGGTGAAGAACCATTGTGGAAAGTTGATAGCTATGACGATCCATTAATTG
TAACCGGCGGAATTGAGGGCCACCCAGGAGCTGAAACGTTGCTAAATTGG
TTTAAGATTGAGAAAGCTGGAAATTTTTCATATGGTGGTGTATACAATAT
TGTCCATTGTCCGAGTGTCTGTCTTTCTTGTCCTAGACGCTGCAACAAAA
TTGGCGTTTCTTCTAAGGATGGCGTTCGACGTCTGGCTCTAGTTGGTGAT
GATGAACCGGCTTTGAATGTTCTGTTTTTTCCATCAGAGGAAAGATCAAG
GCTACTTCAAGCTGCTAACGCAATATCAAGGTTTTTTGAAGCTGCTGAAG
CAATATCAATGGCCGCGTAATGAATGAACTAGCTGTATCATTCTAAATAA
TAGACCAGGCTAGTAACCTTTTATCTCTATTACAGAATAAAAATAACACC
GCCTGTGATCCTTTTGCTGTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
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