CK935640

Overview
NameCK935640
Unique NameCK935640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_CRYNE (Acyl-protein thioesterase 1 OS=Cryptococcus neoformans GN=CNF02430 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.735e-34
Identity = 78/215 (36.28%), Postives = 114/215 (53.02%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKD-ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ-------------AGISCEFKAYPGLGHSISNEGLRNLESWI 772
            +++LHGLGDSG    P+  +  S  F   KW  P AP  PV+ N+G  MPSWFDI  +    +S  D E  +L+ +++V  +I  EV +GI  N + + GFSQGGA+++ ++L   RKL G    S WVP N  ++   +  AK  P+ W HG  D  V +  GQ    FL Q             A     F++YPG+ HS   + + +L+SW+
Sbjct:   20 VIFLHGLGDSGHGWLPVAKMLWS-SFPNVKWILPHAPTIPVSLNHGMAMPSWFDIRHLDKLDNSENDDEQGMLETLKSVDELIQAEVDSGIPENRIVLGGFSQGGAISVLNMLTTKRKLAGVVALSTWVPLNHKIVQMMSEHAKDIPVFWGHGTNDPVVDYRFGQRSVDFLVQKCGYKLLSQGTTFARPGIRFESYPGMPHSSCPQEIEDLKSWL 233          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_YARLI (Acyl-protein thioesterase 1 OS=Yarrowia lipolytica GN=YALI0A18337g PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.911e-28
Identity = 70/209 (33.49%), Postives = 117/209 (55.98%), Query Frame = 2
Query:  170 ILWLHGLGDSGP-----ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFL--EQAGISCEFKAYPGLGHSISNEGLRNLESWIK 775
            +++LHGLGDSG      A E  K    +      K+ FP AP  PV+ N+G  MPSW+DI E+    ++ +D+  +L++V  + ++I +E  AG+  N + + GFSQG A++LA+  L   KLGG    SG+VP    ++ Q  +  + TP+  +HG AD+ + F+ G+    F+  E    + ++  Y GL HS   E + ++ +W++
Sbjct:   19 VIFLHGLGDSGAGWMFLAEEARK----AQRLNHVKFIFPEAPQQPVSLNFGMRMPSWYDIKEL-ANVNAAQDQEGILESVGRLESLIKEETDAGVPANRIVIGGFSQGCAVSLATGCLTQTKLGGIVGLSGYVPIKDYILSQHNTTNQDTPMFLAHGTADQVIRFDYGKLSRDFIINELKFKNVDWHQYEGLTHSCGFEEISDILNWLE 222          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_CANGA (Acyl-protein thioesterase 1 OS=Candida glabrata GN=CAGL0D02398g PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.341e-26
Identity = 74/213 (34.74%), Postives = 108/213 (50.70%), Query Frame = 2
Query:  158 ARNFILWLHGLGDSGPANEPIKTLFTS--PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG--ISCEFKAYPGLGHSISNEGLRNLESWIKTRM 784
            A+  +++LHGLGD+G     +        P F+ T + FP+AP  PVT N G  MPSWFDI     T S+  D     ++++ V   +D  ++ GI+P N+ V GFSQG AL LAS +    K+G     SG+      L +   +    TP+   HG +D  V F  G     F + AG   +  FK+Y GLGHS     L +L  ++K+ +
Sbjct:   14 AKYALIFLHGLGDTGQGWSFLAQYLQQYHPCFESTNFIFPNAPIKPVTANGGMPMPSWFDIKVWDWTTSNV-DTVGFQQSLKEVQKYVDSSISDGIEPQNIIVGGFSQGAALALASAVTLNNKIGAFIGLSGFAYLRNELQETRKNLNPNTPVFHGHGESDDVVPFPIGVQTAEFFKSAGELENYTFKSYRGLGHSADPAELNDLAEFLKSNV 225          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_KLULA (Acyl-protein thioesterase 1 OS=Kluyveromyces lactis GN=KLLA0F17908g PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.423e-25
Identity = 71/209 (33.97%), Postives = 111/209 (53.11%), Query Frame = 2
Query:  158 ARNFILWLHGLGDSGPANEPI-KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQAG--ISCEFKAYPGLGHSISNEGLRNLESWI 772
            A+N IL  HGLGDSG     + + L  SP F  T++ FP+APN  +  N G  MP+WF+I++      +  D   +  +++ +++ I +++  GI P N+ + GFSQG ALTLAS +  P KLGG    SG+       +D    +  K TP+   HG  D  +  + G     F E+       +FK+Y G+ HS S E +++L  ++
Sbjct:   15 AKNVILVFHGLGDSGSGWSFLAEYLQRSPAFAHTRFVFPNAPNMRIDANGGMSMPAWFNIYDW-ANPDARVDVEGIKSSLKVINSFIQEQIDDGISPENIILGGFSQGAALTLASTVTSPYKLGGFFALSGFCRLKKEDLDSIAENKNKDTPVFHGHGDQDPIIPIQYGSDAKKFFEKYFHLSDYDFKSYRGMAHSTSLEEMQDLVQFL 222          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_SCHPO (Acyl-protein thioesterase 1 OS=Schizosaccharomyces pombe GN=SPAC8E11.04c PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.204e-24
Identity = 66/204 (32.35%), Postives = 110/204 (53.92%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFL-EQAGISCEFKAYPGLGHSISNEGLRNLESWIKT 778
            +++LHGLGDSG     +   +++  FK  KW FP+AP+ PVT N G  MP+W+DI+         +DE+ +L++   +H +ID E+A GI  + + + GFSQG  ++L + L YP++L G    SG++P  +      +  AK+ PIL ++   D  V      A   +L     + C  + + G  HS+S+E    +  + +T
Sbjct:   20 VIFLHGLGDSGQGWSFMANTWSN--FKHIKWIFPNAPSIPVTVNNGMKMPAWYDIYSF--ADMKREDENGILRSAGQLHELIDAELALGIPSDRILIGGFSQGCMVSLYAGLTYPKRLAGIMGHSGFLPLASKFPSALSRVAKEIPILLTYMTEDPIVPSVLSSASAKYLINNLQLKCLDRPFEGDAHSLSSESFMAMYKFTQT 219          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_NEUCR (Acyl-protein thioesterase 1 OS=Neurospora crassa GN=B2J23.070 PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.054e-24
Identity = 67/211 (31.75%), Postives = 109/211 (51.66%), Query Frame = 2
Query:  170 ILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPK---DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDA--KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEGLRNLESWIKTRM 784
            ++++HGLGD+G      ++           K+  P AP+ P+T N+G  MP W+DI  I  +A + +   DE+ +L +    H +I KE+ +GI  + + + GFSQGGA+ L S L    KL G    S ++  +    +        K+TPI  +HG AD  V ++ G      L++ G + +F  YPG+GHS   E L  +E ++  R+
Sbjct:   22 VIFIHGLGDTGHGWASAVEQWRRRQRLDEVKFILPHAPSIPITANWGMKMPGWYDIFAIDGSAEALRRNEDEAGILTSQAYFHDLIQKEIDSGIPADRIVIGGFSQGGAMGLFSGLTAKCKLAGIIALSSYLLLSLKFAELVPKPEFNKETPIFMAHGDADPVVNYKLGTMTRDLLKEMGYNVKFTTYPGMGHSACLEELDAIEDFLTERL 232          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA2_HUMAN (Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.504e-24
Identity = 68/190 (35.79%), Postives = 96/190 (50.53%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ--AGISCEFKAYPGLGHS 733
            +++LHGLGD+G +     +    P     K+  P AP  PVT N   VMPSWFD+  + ++  +P+DE+ + KA  N+ A+I+ E+  GI  N + + GFSQGGAL+L + L  P  L G    S W+P + +        AK   IL  HG  D  V    G      L         +FK YPG+ HS
Sbjct:   27 VIFLHGLGDTGHSWADALSTIRLPH---VKYICPHAPRIPVTLNMKMVMPSWFDL--MGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTYPGVMHS 211          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA2_RAT (Acyl-protein thioesterase 2 OS=Rattus norvegicus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.577e-24
Identity = 68/190 (35.79%), Postives = 96/190 (50.53%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ--AGISCEFKAYPGLGHS 733
            +++LHGLGD+G +     +    P     K+  P AP  PVT N   VMPSWFD+  + ++  +P+DE+ + KA  N+ A+I+ E+  GI  N + + GFSQGGAL+L + L  P  L G    S W+P + +        AK   IL  HG  D  V    G      L         +FK YPG+ HS
Sbjct:   27 VIFLHGLGDTGHSWADALSTIRLPH---VKYICPHAPRIPVTLNMKMVMPSWFDL--MGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRNFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRTVVTPARVQFKTYPGVMHS 211          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA2_MOUSE (Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.577e-24
Identity = 68/190 (35.79%), Postives = 96/190 (50.53%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ--AGISCEFKAYPGLGHS 733
            +++LHGLGD+G +     +    P     K+  P AP  PVT N   VMPSWFD+  + ++  +P+DE+ + KA  N+ A+I+ E+  GI  N + + GFSQGGAL+L + L  P  L G    S W+P + +        AK   IL  HG  D  V    G      L         +FK YPG+ HS
Sbjct:   27 VIFLHGLGDTGHSWADALSTIRLPH---VKYICPHAPRIPVTLNMKMVMPSWFDL--MGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRNFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRTVVTPARVQFKTYPGVMHS 211          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_YEAST (Acyl-protein thioesterase 1 OS=Saccharomyces cerevisiae GN=YLR118C PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.977e-24
Identity = 74/214 (34.58%), Postives = 104/214 (48.60%), Query Frame = 2
Query:  158 ARNFILWLHGLGDSGPANEPIKTLFTSPE---FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC-----EFKAYPGLGHSISNEGLRNLESWIK 775
            AR  I++LHGLGD+G     +       +   F+ T + FP+AP   VT N GA+MP+WFDI E   + S   D    + ++ ++   + +E+  GI P  + + GFSQG AL LA+ +  P K+GG    SG+      L         KTPI   HG  D  V    G     F +    SC     EFK Y G+ HS   + L +L S+IK
Sbjct:   13 ARQTIIFLHGLGDTGSGWGFLAQYLQQRDPAAFQHTNFVFPNAPELHVTANGGALMPAWFDILEWDPSFSKV-DSDGFMNSLNSIEKTVKQEIDKGIKPEQIIIGGFSQGAALALATSVTLPWKIGGIVALSGFCSIPGILKQHKNGINVKTPIFHGHGDMDPVVPIGLGIKAKQFYQD---SCEIQNYEFKVYKGMAHSTVPDELEDLASFIK 222          
The following BLAST results are available for this feature:
BLAST of CK935640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
APTH1_CRYNE3.735e-3436.28Acyl-protein thioesterase 1 OS=Cryptococcus neofor... [more]
APTH1_YARLI8.911e-2833.49Acyl-protein thioesterase 1 OS=Yarrowia lipolytica... [more]
APTH1_CANGA8.341e-2634.74Acyl-protein thioesterase 1 OS=Candida glabrata GN... [more]
APTH1_KLULA1.423e-2533.97Acyl-protein thioesterase 1 OS=Kluyveromyces lacti... [more]
APTH1_SCHPO1.204e-2432.35Acyl-protein thioesterase 1 OS=Schizosaccharomyces... [more]
APTH1_NEUCR2.054e-2431.75Acyl-protein thioesterase 1 OS=Neurospora crassa G... [more]
LYPA2_HUMAN3.504e-2435.79Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYP... [more]
LYPA2_RAT4.577e-2435.79Acyl-protein thioesterase 2 OS=Rattus norvegicus G... [more]
LYPA2_MOUSE4.577e-2435.79Acyl-protein thioesterase 2 OS=Mus musculus GN=Lyp... [more]
APTH1_YEAST5.977e-2434.58Acyl-protein thioesterase 1 OS=Saccharomyces cerev... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004553_D09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935640 ID=CK935640; Name=CK935640; organism=Citrus sinensis; type=EST; length=908bp
GCGGGAAGAATAAAAGAAACAAGACCAGANNNGCAGGGATGAATCGATGT
TATTGACGAAACCGATCGTTCTATTTACGGTGATTTTGAGCGGCACCATT
ATATTCATTCTATTTTTCTGGCCGAGTTCATCGTATTCACACGAACAAAA
TCCCATGGCTCGAAACTTTATATTGTGGCTCCATGGCTTGGGTGACTCCG
GTCCAGCCAATGAACCCATCAAAACTCTCTTCACTTCTCCTGAGTTTAAA
CTCACCAAATGGTCCTTCCCTTCTGCTCCTAACAACCCTGTTACTTGTAA
CTATGGTGCTGTGATGCCTTCATGGTTTGACATTCATGAGATTCCTGTGA
CTGCTAGTTCTCCGAAAGATGAATCTAGTTTGCTGAAAGCAGTTCGAAAT
GTGCATGCAATGATAGACAAGGAAGTAGCTGCTGGGATAGATCCTAATAA
TGTTTTCGTCTGTGGATTTAGTCAAGGAGGTGCCTTAACTTTGGCCAGTG
TTCTGTTATACCCAAGAAAACTTGGAGGAGGCGCAATTTTTAGTGGATGG
GTTCCTTTTAATGCTTCTCTGATTGATCAATTTACATCAGATGCAAAAAA
GACACCGATTTTGTGGTCTCATGGAATGGCTGACAGAACAGTATTGTTTG
AAGCTGGACAAGCAGGTCCACCTTTCCTTGAGCAAGCTGGCATAAGCTGT
GAGTTTAAGGCTTATCCTGGTCTTGGCCACTCTATAAGTAATGAGGGGCT
CCGGAACCTTGAATCATGGATCAAGACTCGTATGAGCTGTAGTTCTTCCT
AGCTGTTTTGAGTATTGTTGAAATTATGCCTGATCATTCTTTCAGCTACT
TGGAGGTGATCAGTTGATCATTGATTGGTGATACTGAATGGGATAAGCAA
AACGTGCT
back to top