CK935646

Overview
NameCK935646
Unique NameCK935646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1839 contig Csv1_Contig1839:1..523. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935646 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.514e-30
Identity = 65/128 (50.78%), Postives = 84/128 (65.62%), Query Frame = 3
Query:   69 AQGRCSASQATTVAATLIVLLFLRFHSTEATST-FTVGDTSGWTHNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSKGRNYFICSIPGHCEAGLKLAVDAS 449
            AQG  SA +A  +    +VL+FL F+   A S  +TVGD  GWT     W  GK F+AGD L+F Y+ ++HNV  V    Y+SC ASP S+ F SG D+I LS+G NYFICS+PGHC+ GLK+AV A+
Sbjct:    2 AQGSGSAERALVLG---VVLVFLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKIAVTAA 126          
BLAST of CK935646 vs. ExPASy Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=At2g02850 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 7.033e-28
Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 3
Query:   69 AQGRCSASQATTVAATLIVLLFLRFHSTEA-TSTFTVGDTSGWTHNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSKGRNYFICSIPGHCEAGLKLAVDA 446
            A+GR SAS +     TL+ +  L   +     +T+TVGD+  WT N   W  GK F+AGD L+FNY+  +HNV  VD  +Y +C+    +K ++SGKD+I LSKG+N+FIC+ P HCE+ +K+AV A
Sbjct:    2 AKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKIAVTA 128          
BLAST of CK935646 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26
Identity = 47/95 (49.47%), Postives = 71/95 (74.74%), Query Frame = 3
Query:  162 STFTVGDTSGWTHNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSKGRNYFICSIPGHCEAGLKLAVDA 446
            + + VG + GWT N +SW  GK+F+AGD L+FNY+  +HNV VV+   + +C     +K ++SG+DQIKL KG++YFIC+ PGHC++G+K+AV+A
Sbjct:    1 AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNA 95          
BLAST of CK935646 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.618e-18
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 3
Query:  174 VGDTSGWT----HNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHCEAGLKLAV 440
            VGD++GWT    ++   WA+  +F  GD+L+FNY+   HNV  VD   ++SC +S  + S++SG D I L + G  YF+C IPGHC+ G K+ +
Sbjct:    6 VGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99          
BLAST of CK935646 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.277e-17
Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  162 STFTVGDTSGWT--HNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHCEAGLKLAV 440
            + +TVGDTSGW    +  +WA+ K F  GD+L+FNY A  H V  V  ++Y+SC +  +  + S+G   I L K G++YFIC +PGH   G+KL++
Sbjct:   25 TVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120          
BLAST of CK935646 vs. ExPASy Swiss-Prot
Match: STEL_RHUVE (Stellacyanin OS=Rhus vernicifera PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  162 STFTVGDTSGWTHNI-------QSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKL-SKGRNYFICSIPGHCEAGLKLAVDAS 449
            + +TVGD++GW             WA+ K F  GD L+F YD   HNV  V   NYQSC  +    S+++G ++I L + G+ Y+IC +P HC+ G K+ ++ +
Sbjct:    1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINVT 104          
BLAST of CK935646 vs. ExPASy Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.003e-15
Identity = 50/116 (43.10%), Postives = 65/116 (56.03%), Query Frame = 3
Query:  105 VAATLIVLLFLRFHSTEATSTFTVGDTSGWTHNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHC--EAGLKLAVD 443
            VAA   +LL L         T+T+  T+G  ++   WA GK F+ GD L F Y +S H V VVD   Y  C AS ++++ S G  +I L   G NYFICS PGHC    G+KLAV+
Sbjct:   11 VAAATALLLVLTIVPGAVAVTYTIEWTTGVDYS--GWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVN 123          
BLAST of CK935646 vs. ExPASy Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.574e-11
Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = 3
Query:  102 TVAATLIVLLFLRFHSTEATST--FTVGDTSGWTHNIQS--WANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFS--SGKDQIKLSKGRNYFICSIPGHCEAGLKLAV 440
            TV  T +VL FL        +   +TVG+   W  NI    WA GK F  GD L F +D + HN+  V+  +Y+ C A    ++++  +G+D + L++ ++Y++    G C  G+KL+V
Sbjct:    5 TVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV 123          
The following BLAST results are available for this feature:
BLAST of CK935646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
BABL_LILLO1.514e-3050.78Chemocyanin OS=Lilium longiflorum PE=1 SV=1[more]
BABL_ARATH7.033e-2844.88Basic blue protein OS=Arabidopsis thaliana GN=At2g... [more]
BABL_CUCSA2.955e-2649.47Basic blue protein OS=Cucumis sativus PE=1 SV=1[more]
MAVI_CUCPE8.618e-1842.55Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BCP_PEA4.277e-1742.71Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
STEL_RHUVE1.376e-1536.54Stellacyanin OS=Rhus vernicifera PE=1 SV=1[more]
BCB2_ARATH4.003e-1543.10Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 ... [more]
LAML_ARATH1.574e-1132.77Lamin-like protein OS=Arabidopsis thaliana GN=At5g... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004553_C06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935646 ID=CK935646; Name=CK935646; organism=Citrus sinensis; type=EST; length=523bp
GCGGGGGTGAACCCCATTTATAAACTTAAAGANNNTCTTCTACCGTCACT
ATACGAATGGCTCGCCAGGCCCAGGGAAGATGCAGTGCAAGCCAAGCCAC
AACTGTTGCAGCCACCTTGATTGTTTTGCTCTTTCTTCGGTTTCATAGTA
CTGAGGCAACCAGTACTTTCACCGTCGGTGACACTTCAGGCTGGACCCAC
AACATTCAAAGTTGGGCCAATGGCAAACAGTTTAAGGCCGGCGACACACT
CATTTTCAACTATGACGCATCGATTCACAATGTAGCAGTTGTTGATGGGA
ATAACTACCAGAGCTGCAGGGCTTCACCAACCTCGAAGAGTTTCTCCAGC
GGAAAAGATCAAATCAAACTATCAAAGGGACGTAACTATTTCATTTGTAG
TATCCCTGGCCATTGCGAAGCTGGCCTGAAGCTTGCTGTTGATGCTTCTT
GAGCTACAATTATCACTGTTGCTTTAATTAATCTCCAAATTCGCAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA
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