CK935656

Overview
NameCK935656
Unique NameCK935656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1841 contig Csv1_Contig1841:1..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 1.000e-115
Identity = 187/235 (79.57%), Postives = 202/235 (85.96%), Query Frame = 2
Query:   89 LLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFCH 793
            LL LS     +FILTLVNNCP+ +WPAIQPNAGHPVLERGGF LHSLTHRSFPAP  HWSGRIWARTGC Y HGKF C TGDCG R+EC+GLGGA PATLAQF LHHGH D S+ GVSLVDGFN+P+TVTPHEGKGVCPVVGCRA+LL +CP  LQ RS  GHG VV CKS CEAF +DE CCRNHYNSPQTC+ SS+S+FFKHACPAT TYAHDSPSLMH+CSSPRELKVIFCH
Sbjct:   18 LLSLSQSTNPNFILTLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQHGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPLTVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFCH 252          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.974e-52
Identity = 113/248 (45.56%), Postives = 149/248 (60.08%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAH-GKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            MAS + +F+ A +LLL  S+A AS ++   N C  PVWP IQP+AG  +L  GGF L +    S   P   WSGR W R GCT+   G+  C TGDCG  L CNG GG  PATLA+ +L     +L    VSLVDG+N+ M++ P +G G C   GC +DL   CP  LQVRS  G  RVVACKS C AF + + CC   + +PQ+C+ +++S+ FK ACP   +YA+D P+ +  CS    + V FC
Sbjct:    1 MASIN-LFLFAFLLLL--SHASASTVI-FYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPL-WSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP---ELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGK-RVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYI-VTFC 238          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.870e-47
Identity = 97/252 (38.49%), Postives = 137/252 (54.37%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYA----KASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            MA+   + ++A +++ +++           L +VNNC   VWP +   AGHP  + GGF+L +    +   PA  WSGR+W R GC++ + G+ SC TGDCG  L CNG  GATPAT+ + +L    + +    VSLVDGFN P+++    G   C    C AD+   CP  L+VR     GRV  C+S C A G D  CC   Y SP  CR + FS  FK  CP   +YA+D  + ++ C + R L + FC
Sbjct:    1 MATPLLLVVNAILIMAITACGGGGGNGGIQLIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAG-WSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRD--REGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYL-ITFC 248          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.238e-45
Identity = 101/249 (40.56%), Postives = 132/249 (53.01%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            M  T  + +S ++ +L    A A+ I +  NNCP+ VWP    +   P L   GF L S        P   W+GR WARTGC T A GKF C T DC   ++ CNG G   PATLA+F++  G        VSLVDGFN+PM+VTP  G G C    C A++ A CP  LQ +     G VVAC S C  FGT + CC    N+P+TC  +++SE F +ACP   +YA+D       C+      + FC
Sbjct:    1 MMKTLVVVLSLSLTILSFGGAHAATI-SFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVP-WNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQ-DFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKG--SDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC 244          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.238e-45
Identity = 108/248 (43.55%), Postives = 133/248 (53.63%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            MA+ S I I   ++ + S  A  +   TL NNCP  VW       G P L  GGF L     R   APA  WSGR WARTGC + A G   CVTGDCG  L CNG GG  P TLA+F+L  G        VSLVDG+NV + + P  G G C   GC +DL A CP  L+V        VVACKS CE F TD+ CCR   + P+TC  + +S  FK+ACP   +YA+D  +    C+     ++ FC
Sbjct:    1 MANISSIHI-LFLVFITSGIAVMATDFTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQLTAPAG-WSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNG-GGVPPVTLAEFTLV-GDGGKDFYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMD---QNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTG-ANYEITFC 238          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.576e-44
Identity = 103/250 (41.20%), Postives = 134/250 (53.60%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLH-HGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            M S     +  T+ +L  S A A+ I T  NNCP  VWP        P L   GF L S   RS  AP+  WSGR W RT C T A GKF+C T DCG  ++ CNG G   PATL + ++  +G  D     VSLVDGFN+PM+V P  G G C    C A++   CP  LQV++    G V++CKS C AFG  + CC    N+P+TC  + +SE F+  CP   +YA+D  +    CS   +  + FC
Sbjct:    2 MKSQVASLLGLTLAILFFSGAHAAKI-TFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSP-WSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYD--VSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 245          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.560e-42
Identity = 101/250 (40.40%), Postives = 130/250 (52.00%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSL-HHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            M S + +    T+ +L  S A A+ I T  N C + VWP        P L   GF L +   RS  AP+  WSGR + RT C T A GKF+C T DCG  ++ CNG G A PATL + ++  +G  D     VSLVDGFN+PM+V P  G G C    C AD+   CP  LQV+     G V+ACKS C AF   + CC    + P+TC    +S+ FK  CP   +YA+D  S    CS      + FC
Sbjct:    2 MKSQAALLGLTTLAILFFSGAHAAKI-TFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSP-WSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYD--VSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKG--SDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFC 245          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.075e-40
Identity = 89/248 (35.89%), Postives = 124/248 (50.00%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            M  T  ++     L  LS    A   +T  NNCP  +WP    +   P L   GF L S    +    A  W GR WART CT   GKF+C T DC   ++ CNG G   PA+L + ++   +  +    VSLVDG+N+P++V    G G C    CRA++ A CP  LQV+       V+ACKS C AF   + CC   +++ +TC A+ +S  FK  CP   +YA+D  +    CS   +  + FC
Sbjct:    1 MMKTLALYGLTLALFFLSGAHSAK--ITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAP-WKGRFWARTRCTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIA-ANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKG--SDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFC 242          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.526e-39
Identity = 98/249 (39.36%), Postives = 126/249 (50.60%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            M  T    +S ++ LL    A A+  ++  NNCP+ VWPA   + G+P L   GF L S        P   WSGR WART C T A GKF C T DC   +L CNG  G  PATLA+F++  G        VSLVDGFN+PM+VTP  G G C +  C A++   CP  LQ       G VVAC S C  FG  + CC     + + C  +++S+ F   CP   +YA D    +  CS      + FC
Sbjct:    1 MMKTLGAVLSLSLTLLSFGGAHAA-TMSFKNNCPYTVWPA---SFGNPQLSTTGFELASQASFQLDTPVP-WSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQ-DFYDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQKIG--SDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFC 241          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.993e-39
Identity = 91/239 (38.08%), Postives = 120/239 (50.21%), Query Frame = 2
Query:   86 ILLLLSSYAKA-SFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLH-HGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            +L+ LS +A   S   T  N CP  VWP      G P L   GF L S    S    A  WSGR W R+ C+  + GKF C TGDCG  ++ CNG G + PA+L + +L  +G  D     VSLVDGFN+P+ + P  G G C    C A++   CP  L  +     G V+ CKS C A    + CC   Y +P TC  + FS+ FK+ CP   +YA+D  S    C      ++ FC
Sbjct:   10 VLVFLSEHAGVYSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAP-WSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYD--VSLVDGFNLPIKLAPRGGSGDCNSTSCAANINTVCPAELSDKG--SDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFC 243          
The following BLAST results are available for this feature:
BLAST of CK935656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
OLP1_SOLLC1.000e-11579.57Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ARATH5.974e-5245.56Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLPH_ORYSJ9.870e-4738.49Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_PRUAV9.238e-4540.56Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
PR5_ARATH9.238e-4543.55Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TP1A_MALDO1.576e-4441.20Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_PRUPE9.560e-4240.40Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA3.075e-4035.89Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP2_PRUPE1.526e-3939.36Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP1_PYRPY1.993e-3938.08Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_B10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935656 ID=CK935656; Name=CK935656; organism=Citrus sinensis; type=EST; length=843bp
GGGGACACAACACCTGNNNTTGTTGTTTTTAGTTTTTCTTAAAACGAAAA
TGGCCTCAACTTCGCCCATTTTCATTTCAGCAACTATCCTTCTTCTCCTC
AGCTCCTACGCCAAAGCAAGCTTCATACTGACCCTAGTCAACAACTGCCC
CTTCCCCGTCTGGCCGGCCATCCAGCCCAACGCCGGCCACCCAGTCCTCG
AACGTGGCGGCTTCTATCTCCATAGCCTCACCCACCGCTCCTTCCCCGCT
CCGGCCCAGCACTGGTCGGGCCGGATCTGGGCCAGAACCGGCTGCACCTA
CGCCCACGGCAAATTCTCCTGCGTCACGGGCGACTGCGGCCACCGCTTGG
AATGCAACGGACTCGGCGGGGCGACTCCAGCCACCCTGGCCCAGTTCAGC
CTCCACCACGGCCACAACGACCTCTCCTCCTGCGGCGTCTCTCTAGTCGA
CGGCTTCAACGTCCCCATGACTGTCACCCCGCACGAGGGCAAGGGCGTCT
GTCCGGTAGTGGGTTGTCGCGCTGACCTGCTAGCCACGTGTCCTCAGAAC
CTGCAGGTGAGGTCACCGCCGGGTCACGGCCGCGTGGTGGCATGTAAGAG
TGGGTGTGAGGCGTTTGGTACGGACGAGCTGTGTTGTAGGAACCATTACA
ACAGTCCGCAGACATGCCGGGCTTCGAGCTTTTCGGAGTTCTTCAAGCAC
GCTTGTCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCA
TGACTGCTCCTCGCCACGTGAGCTAAAAGTTATTTTCTGTCACTAGAGAA
GCATGAGAATAATAATAAGCTGGAGCATNCAGCTTCACAGTGC
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