CK935671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935671 vs. ExPASy Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 4.367e-57 Identity = 111/153 (72.55%), Postives = 128/153 (83.66%), Query Frame = 2 Query: 104 LFTPSTITVRKHQISPSSISFQGLRPLNTR-AKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATPSNGYDPKFFG 559 L +P+T + +P+SISF GLRPL + + LPKL+T+ +++S ++AEL+ +VISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILAT SNGYDP FFG Sbjct: 8 LLSPTTFSTAISHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG 160
BLAST of CK935671 vs. ExPASy Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.839e-47 Identity = 101/134 (75.37%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 161 SFQGLRPL--NTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATPSNGYDPKFF 556 SF GLRPL N + L+ S+ R S +AEL+ LVISLSTGLSLFLGRFVFFNFQREN+AKQ +PEQNG++HFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT SNGYDP FF Sbjct: 36 SFSGLRPLKLNISSNNSSSSLSMSSARRSMT-CRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQ-VPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167
BLAST of CK935671 vs. ExPASy Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.182e-42 Identity = 91/139 (65.47%), Postives = 107/139 (76.98%), Query Frame = 2 Query: 143 ISPSSISFQGLRPLNTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATPSNGYDPKFFG 559 +SP +++ L P + RA ++ A+R+ +A L +VISLSTGLSL +GRFVFFNFQRENVAKQ +PEQNG THFEAGD RAKE+ +LKSNDPVGFN+VDVLAWGSIGHIVAYYILAT SNGYDP FFG Sbjct: 9 LSPPAVAGLRLAP-SPRAAASFRGVSPPARRSV--AARAALEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWGSIGHIVAYYILATTSNGYDPPFFG 143
BLAST of CK935671 vs. ExPASy Swiss-Prot
Match: PSAG_TORRU (Photosystem I reaction center subunit V, chloroplastic OS=Tortula ruralis GN=PSAG PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22 Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 266 NTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATPSNGYD 544 NT +IS ST L LGRFVF FQR V++ GLPEQNGV + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT +NGY+ Sbjct: 17 NTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTNDPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109
BLAST of CK935671 vs. ExPASy Swiss-Prot
Match: PSAG_PEA (Photosystem I reaction center subunit V (Fragment) OS=Pisum sativum GN=PSAG PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.622e-13 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 2 Query: 260 ELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 376 ELN LVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ Sbjct: 1 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 39
BLAST of CK935671 vs. ExPASy Swiss-Prot
Match: PSAG_CHLRE (Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAG PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.774e-11 Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 2 Query: 254 KAELNTPLVISLSTGLSLFLGRFVFFNFQRE--NVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATPS 532 KA L+ +VIS ST L +GRFVF +QR N P+ G T+F+ D++ ++ +NDP GFNI+DV WG++GH V + +LA S Sbjct: 29 KAALDPQIVISGSTAAFLAIGRFVFLGYQRREANFDSTVGPKTTGATYFD--DLQKNS--TIFATNDPAGFNIIDVAGWGALGHAVGFAVLAINS 119 The following BLAST results are available for this feature:
BLAST of CK935671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935671 ID=CK935671; Name=CK935671; organism=Citrus sinensis; type=EST; length=800bpback to top |