CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7718 contig Csv1_Contig7718:38..961. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.080e-24
Identity = 65/190 (34.21%), Postives = 116/190 (61.05%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++++ L+TG SRG+GR++A +LA+ G+ V +  + ++DK  ++  E+       F +  ++     V+E+ + VV + G  D++VNNAG I K+N +  +  +E+D VIDTN+KG+ N ++   P M+  + G I+N++S  G  G    A Y A+K  V GL+++ A+E+   G+ + A+ PG I +DM
Sbjct:    1 MNKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAG-ITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.080e-24
Identity = 65/190 (34.21%), Postives = 116/190 (61.05%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++++ L+TG SRG+GR++A +LA+ G+ V +  + ++DK  ++  E+       F +  ++     V+E+ + VV + G  D++VNNAG I K+N +  +  +E+D VIDTN+KG+ N ++   P M+  + G I+N++S  G  G    A Y A+K  V GL+++ A+E+   G+ + A+ PG I +DM
Sbjct:    1 MNKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAG-ITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2049_STAEQ (Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.779e-23
Identity = 56/192 (29.17%), Postives = 119/192 (61.98%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632
            + K   +  ++TG S G+G A+A++L+++G +++   R + +L  +  +L  P   +  +V ++SN  ++++ + V++  G  DI+VN+AG  + ++KI D + E++DT+ID N+KG  ++L+  +P ++    G I+N++S  G       A Y A+K A+  +++S+ KE+   G+ + +++PG+++T M
Sbjct:    1 MAKVKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQQLNTPAKVVSADVTVKSN--IDDMLKAVIDHFGHIDIVVNSAGQ-SLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEKELARTGVKVTSISPGMVDTPM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2036_STAES (Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.779e-23
Identity = 56/192 (29.17%), Postives = 119/192 (61.98%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632
            + K   +  ++TG S G+G A+A++L+++G +++   R + +L  +  +L  P   +  +V ++SN  ++++ + V++  G  DI+VN+AG  + ++KI D + E++DT+ID N+KG  ++L+  +P ++    G I+N++S  G       A Y A+K A+  +++S+ KE+   G+ + +++PG+++T M
Sbjct:    1 MAKVKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQQLNTPAKVVSADVTVKSN--IDDMLKAVIDHFGHIDIVVNSAGQ-SLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEKELARTGVKVTSISPGMVDTPM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 64/190 (33.68%), Postives = 115/190 (60.53%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++++ L+TG SRG+GR++A +LA+ G+ V +  + +++K  ++  E+       F +  ++     V+ + + VV + G  D++VNNAG I ++N +  +  +E+D VIDTN+KG+ N ++   P M+  + G I+N+SS  G  G    A Y A+K  V GL++S A+E+   G+ + A+ PG I +DM
Sbjct:    3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 64/190 (33.68%), Postives = 115/190 (60.53%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++++ L+TG SRG+GR++A +LA+ G+ V +  + +++K  ++  E+       F +  ++     V+ + + VV + G  D++VNNAG I ++N +  +  +E+D VIDTN+KG+ N ++   P M+  + G I+N+SS  G  G    A Y A+K  V GL++S A+E+   G+ + A+ PG I +DM
Sbjct:    3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 64/190 (33.68%), Postives = 115/190 (60.53%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++++ L+TG SRG+GR++A +LA+ G+ V +  + +++K  ++  E+       F +  ++     V+ + + VV + G  D++VNNAG I ++N +  +  +E+D VIDTN+KG+ N ++   P M+  + G I+N+SS  G  G    A Y A+K  V GL++S A+E+   G+ + A+ PG I +DM
Sbjct:    3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 64/190 (33.68%), Postives = 115/190 (60.53%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++++ L+TG SRG+GR++A +LA+ G+ V +  + +++K  ++  E+       F +  ++     V+ + + VV + G  D++VNNAG I ++N +  +  +E+D VIDTN+KG+ N ++   P M+  + G I+N+SS  G  G    A Y A+K  V GL++S A+E+   G+ + A+ PG I +DM
Sbjct:    3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 64/190 (33.68%), Postives = 115/190 (60.53%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++++ L+TG SRG+GR++A +LA+ G+ V +  + +++K  ++  E+       F +  ++     V+ + + VV + G  D++VNNAG I ++N +  +  +E+D VIDTN+KG+ N ++   P M+  + G I+N+SS  G  G    A Y A+K  V GL++S A+E+   G+ + A+ PG I +DM
Sbjct:    3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 64/190 (33.68%), Postives = 115/190 (60.53%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++++ L+TG SRG+GR++A +LA+ G+ V +  + +++K  ++  E+       F +  ++     V+ + + VV + G  D++VNNAG I ++N +  +  +E+D VIDTN+KG+ N ++   P M+  + G I+N+SS  G  G    A Y A+K  V GL++S A+E+   G+ + A+ PG I +DM
Sbjct:    3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
FABG_STAES6.080e-2434.213-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ6.080e-2434.213-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
Y2049_STAEQ8.779e-2329.17Uncharacterized oxidoreductase SERP2049 OS=Staphyl... [more]
Y2036_STAES8.779e-2329.17Uncharacterized oxidoreductase SE_2036 OS=Staphylo... [more]
FABG_STAAW1.498e-2233.683-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS1.498e-2233.683-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR1.498e-2233.683-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN1.498e-2233.683-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM1.498e-2233.683-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC1.498e-2233.683-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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