CK935728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: PMP22_ARATH (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.860e-43 Identity = 84/177 (47.46%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 159 KEAWRKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKISGVEKXXXXXXXXXXXFDFGYGVPFGHFLNKFLDAIFKGR-DNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESAAI 686 K ++YL QLQ PLRTKAITAGVL+G SD ++QK+SG++K F G+ P GHF + +LD FKG+ D ++VAKKV+LEQL SP + LFM Y+G+V+E PW V ++++K YP VQ T+W +P V W+N++Y P FR + SLVA W IF+ L+A S + Sbjct: 8 KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTL 184
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: PX24C_DICDI (PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18 Identity = 53/167 (31.74%), Postives = 92/167 (55.09%), Query Frame = 3 Query: 177 YLIQLQVRPLRTKAITAGVLAGCSDAIAQKISGVEKXXXXXXXXXXXFDFGY-GVPFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKA 671 Y+ +L+ +P++TKA+T+ L+ S +AQK +EK +G P H+ + LD +FK +D K++++QL+F+P+IN F + +++GKP + K +P ++ SWKVWP +NF++ P R LF +LV CW I++++ A Sbjct: 17 YMKKLKSKPIQTKALTSATLSFISSVVAQKF--IEKKKINWNAVVKFTVWGLISSPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLA-ILDGKPKSILFKLYFDLFPTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILA 179
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: PX24D_DICDI (PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.989e-15 Identity = 52/172 (30.23%), Postives = 83/172 (48.26%), Query Frame = 3 Query: 156 VKEAWRKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKIS----GVEKXXXXXXXXXXXFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 659 +K A YL QL P+ TKA+T+G L SD++ Q I +K F F P H+ K+LD F + + K+ ++Q++ SP NFLF + G ++EGK +++K++KD+ + VWP + +VNF Y R F ++ W F+ Sbjct: 8 LKLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAFL 178
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: PXMP2_MOUSE (Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.638e-14 Identity = 49/178 (27.53%), Postives = 92/178 (51.69%), Query Frame = 3 Query: 144 MSNIVKEAWRKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKISGVEKXXXXXXXXXXXFDF-GYGV----PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDY-PAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 659 + ++ K A +YL+ L++ P+ TKA+++G+L+ + +AQ I ++ + YG+ P H+L F++ + K++LL++L F+P LF L+ EGK + K+R + PA+Q +W++W + ++N Y P QFR LF ++ A W ++ Sbjct: 14 LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLL-EGKNVSVFVAKMRSGFWPALQM-NWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: PXMP2_RAT (Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.640e-13 Identity = 50/178 (28.09%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 144 MSNIVKEAWRKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKISGVEKXXXXXXXXXXXFDF-GYGV----PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDY-PAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 659 + ++ K A +YL+ L+ P+ TKA+++G+L+ + +AQ I +K + YG+ P H+L F++ + K++LL++L F+P LF L+ EGK + K+R + PA+Q +W++W + ++N Y P QFR LF ++ A W ++ Sbjct: 14 LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLL-EGKNISVFVAKMRSGFWPALQM-NWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: PXMP2_BOVIN (Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 4.773e-13 Identity = 49/177 (27.68%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 159 KEAWRKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKISGVEKXXXXXXXXXXXFDFGYGV-------PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVV---EGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 659 + A +YL L++ P+ TKA T+G+L+ + +AQ I +K Y + P GHF ++ + K++LL++L+F+P F++ F LV+ EG+ + K++ + +W+VW V ++N Y P QFR LF +LVA W ++ Sbjct: 19 RRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAP----AFLSLFFLVMNFLEGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYL 191
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: MPV17_CAEBR (Mpv17-like protein OS=Caenorhabditis briggsae GN=CBG20693 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.141e-13 Identity = 43/180 (23.89%), Postives = 86/180 (47.78%), Query Frame = 3 Query: 171 RKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKISGVEKXXXXXXXXXXXFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESAAIKKD*MEAP 710 R + L RPL T+ I +G + G DA Q ++G + + P + + L+ + + V ++ ++Q +FSP+ N + + L+ EG + + K++ D+ V +S ++WP V +NF + P +R + +VA W +++ K ++ A++ +EAP Sbjct: 5 RTFNATLARRPLATQVIVSGAVCGAGDAFTQYLTGQKSWDYKRTARFTCLAAVFIAPPLNVWFRVLERVRHSNRHAQVFSRMSIDQFMFSPFFNAIILVNLRLL-EGFSFSKSVDKMKNDWYDVYTSSLRLWPAVQLINFYFVPLNYRVILIQVVAFFWNSWLSFKTQTPALEDPTIEAP 183
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: PX24B_DICDI (PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.814e-12 Identity = 45/176 (25.57%), Postives = 80/176 (45.45%), Query Frame = 3 Query: 156 VKEAWRKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKIS-------GVEKXXXXXXXXXXXFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 662 +++ W YL L PL TK+++ G L G D +AQ++ K Y P H+ + LD + KG + KK+L++QL+F+P FMT + ++ ++ + AV+ +W +WP +NF P R L+ S+++ W +F++ Sbjct: 1 MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMSTVGIFYSGPMLHYWYRSLDIMVKGEGRSVIIKKMLIDQLLFAPVAIGGFMTVTNFINNKGELKNLENFTKELFYAVKI-NWLIWPAAQIINFSLVPPNLRVLYSSIISIFWGMFLS 175
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: PXMP2_HUMAN (Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12 Identity = 45/173 (26.01%), Postives = 81/173 (46.82%), Query Frame = 3 Query: 159 KEAWRKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKISGVEKXXXXXXXXXXX------FDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 659 + A +YL+ L++ P+ TKA T+G+L+ + +AQ I K + F + P HF F++ + +++LL++L+F+P LF + EGK + K+R + +W+VW + ++N Y P +FR LF +L A W ++ Sbjct: 19 RRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFL-EGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYL 190
BLAST of CK935728 vs. ExPASy Swiss-Prot
Match: MPV17_RAT (Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.176e-11 Identity = 47/171 (27.49%), Postives = 75/171 (43.86%), Query Frame = 3 Query: 168 WRKYLIQLQVRPLRTKAITAGVLAGCSDAIAQKI---SGVEKXXXXXXXXXXXFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKA 671 WR Y L P + + +TAG L G D I+Q++ G+++ G+ P + LD + G + KK+LL+Q F+P F+ G V+ G K+++DYP T++ +WP V NF P +R VA W +++ KA Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVGPVVGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVG-VLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKA 173 The following BLAST results are available for this feature:
BLAST of CK935728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935728 ID=CK935728; Name=CK935728; organism=Citrus sinensis; type=EST; length=913bpback to top |